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rifcsphigho2_02_scaffold_25322

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_25322_1
unknown

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1..561
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

rifcsphigho2_02_scaffold_25322_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(693..1949)
-----------------
DNA (1257bp)
protein (419aa)
DNA primase Tax=CG_Woesearch_02
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA primase
rifcsphigho2_02_scaffold_25322_3

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2437..3162
-----------------
DNA (726bp)
protein (242aa)
RIO kinase 1 {ECO:0000313|EMBL:KHO50185.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KHO50185.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Non-specific serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase involved in cell cycle control id=5800010 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_25322_4
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3165..3353
-----------------
DNA (189bp)
protein (63aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A341_THESM
Riboflavin kinase
rifcsphigho2_02_scaffold_25322_5
AR4, Woesearchaeaota, DPANN, Archaea

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3438..3902
-----------------
DNA (465bp)
protein (155aa)
riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=5043976 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=AR4
ribC; riboflavin synthase (EC:2.5.1.9)
rifcsphigho2_02_scaffold_25322_6
AR4, Woesearchaeaota, DPANN, Archaea

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4077..4484
-----------------
DNA (408bp)
protein (136aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=5043977 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=AR4
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
rifcsphigho2_02_scaffold_25322_7
unknown

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4562..4936
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

rifcsphigho2_02_scaffold_25322_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4984..6039
-----------------
DNA (1056bp)
protein (352aa)
riboflavin biosynthesis protein RibD n=1 Tax=Hippea alviniae RepID=UPI0003B36CCB
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sour
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase
rifcsphigho2_02_scaffold_25322_9

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6054..6623
-----------------
DNA (570bp)
protein (190aa)
Ribosomal RNA assembly protein (KRR1) {ECO:0000313|EMBL:AIF00781.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_13
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
KH domain protein
rifcsphigho2_02_scaffold_25322_10

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6751..8466
-----------------
DNA (1716bp)
protein (572aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_25322_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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8546..9652
-----------------
DNA (1107bp)
protein (369aa)
Type 2 DNA topoisomerase 6 subunit A; K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RBG_13_Woesearchaeota_36_6_curated
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Type 2 DNA topoisomerase 6 subunit A
rifcsphigho2_02_scaffold_25322_12
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(9649..10230)
-----------------
DNA (582bp)
protein (194aa)
Multiple antibiotic resistance (MarC)-related protein id=3194368 bin=GWC1_Spirochaetes_27_15 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein Tax=GWD1_Spirochaetes_27_9_curated
multiple antibiotic resistance (MarC)-like protein
Displaying 12 items

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