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rifcsphigho2_02_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 327 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_21_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(145..1506)
-----------------
DNA (1362bp)
protein (454aa)
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5240589 bin=GW2011_AR10_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_21_2
unknown

Not on your lists

1588..1845
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_3
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

2040..2252
-----------------
DNA (213bp)
protein (71aa)
rifcsphigho2_02_scaffold_21_4
unknown

Not on your lists

2347..2748
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(2827..3696)
-----------------
DNA (870bp)
protein (290aa)
transmembrane_regions 68..90 id=67329 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
rifcsphigho2_02_scaffold_21_6
unknown

Not on your lists

3926..4606
-----------------
DNA (681bp)
protein (227aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_7
unknown

Not on your lists

comp(4699..5250)
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_trna_13
unknown

Not on your lists

comp(5427..5511)
-----------------
DNA (85bp)
transferRNA
rifcsphigho2_02_scaffold_21_8
unknown

Not on your lists

5662..6114
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_9
unknown

Not on your lists

6141..6830
-----------------
DNA (690bp)
protein (230aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_10
unknown

Not on your lists

comp(6819..8030)
-----------------
DNA (1212bp)
protein (404aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_11

Not on your lists

comp(8056..9465)
-----------------
DNA (1410bp)
protein (470aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B n=1 Tax=mine drainage metagenome RepID=T1B223_9ZZZZ rbh
glutamyl-tRNA(Gln) amidotransferase subunit B
rifcsphigho2_02_scaffold_21_12

Not on your lists

comp(9462..10865)
-----------------
DNA (1404bp)
protein (468aa)
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=mine drainage metagenome RepID=T1BAI4_9ZZZZ rbh
rifcsphigho2_02_scaffold_21_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10866..11168)
-----------------
DNA (303bp)
protein (101aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003702958
rifcsphigho2_02_scaffold_21_14
unknown

Not on your lists

11297..12283
-----------------
DNA (987bp)
protein (329aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_15
unknown

Not on your lists

12580..12768
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_16
Araucaria cunninghamii, Araucaria, Araucariales, Pinidae, Streptophyta, Viridiplantae

Not on your lists

12860..13684
-----------------
DNA (825bp)
protein (275aa)
Putative uncharacterized protein n=2 Tax=Vitis vinifera RepID=F6H437_VITVI
uncharacterized LOC100248121
rifcsphigho2_02_scaffold_21_17
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(13708..14289)
-----------------
DNA (582bp)
protein (194aa)
Cytidyltransferase-related domain protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AD00_THEID
cytidyltransferase-like domain protein
rifcsphigho2_02_scaffold_21_18
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14336..14860)
-----------------
DNA (525bp)
protein (175aa)
3-dehydroquinate dehydratase (EC:2.7.1.71 4.2.1.10)
Shikimate kinase n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V7W0_9FUSO
rifcsphigho2_02_scaffold_21_19
unknown

Not on your lists

comp(14969..16195)
-----------------
DNA (1227bp)
protein (409aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(16231..17157)
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein id=18248394 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative transcriptional regulator
rifcsphigho2_02_scaffold_21_21
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

17878..18309
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMI1_PYRSN
hypothetical protein
rifcsphigho2_02_scaffold_21_22
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18306..18608)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TN95_METAC
hypothetical protein
rifcsphigho2_02_scaffold_21_23
unknown

Not on your lists

18800..19003
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_24
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(18907..20175)
-----------------
DNA (1269bp)
protein (423aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX09_FERPA rbh
MiaB-like tRNA modifying enzyme
rifcsphigho2_02_scaffold_21_25
unknown

Not on your lists

comp(20216..20386)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_26
unknown

Not on your lists

comp(20451..20711)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21_27
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(20727..21347)
-----------------
DNA (621bp)
protein (207aa)
TM helix repeat-containing protein id=5040518 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
TM helix repeat-containing protein
rifcsphigho2_02_scaffold_21_28
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(21387..21749)
-----------------
DNA (363bp)
protein (121aa)
Putative uncharacterized protein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RTV9_CENSY
hypothetical protein
rifcsphigho2_02_scaffold_21_29
unknown

Not on your lists

comp(21786..22358)
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

Displaying items 1-30 of 327 in total

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