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rifcsphigho2_02_scaffold_1256

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1256_1
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(1..1959)
-----------------
DNA (1959bp)
protein (653aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Isoleucine--tRNA ligase id=4170461 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
isoleucyl-tRNA synthetase
rifcsphigho2_02_scaffold_1256_2
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(1989..2855)
-----------------
DNA (867bp)
protein (289aa)
NAGK; acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=NAGK_ARATH rbh
rifcsphigho2_02_scaffold_1256_3
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(2857..3570)
-----------------
DNA (714bp)
protein (238aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=uncultured bacterium RepID=K2E1G8_9BACT
rifcsphigho2_02_scaffold_1256_4
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

3653..4174
-----------------
DNA (522bp)
protein (174aa)
Endoribonuclease YbeY n=4 Tax=Hydrogenobaculum RepID=M1R8W5_9AQUI
protein of unknown function UPF0054; K07042 probable rRNA maturation factor Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
metalloprotein, YbeY/UPF0054 family
rifcsphigho2_02_scaffold_1256_5
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

4208..5599
-----------------
DNA (1392bp)
protein (464aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Cysteine--tRNA ligase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T4M3_THEA1
cysteinyl-tRNA synthetase
rifcsphigho2_02_scaffold_1256_6
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

5581..6447
-----------------
DNA (867bp)
protein (289aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
rifcsphigho2_02_scaffold_1256_7
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

6595..7068
-----------------
DNA (474bp)
protein (158aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
rifcsphigho2_02_scaffold_1256_8
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

7293..8978
-----------------
DNA (1686bp)
protein (562aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MDW7_ANAVT
rifcsphigho2_02_scaffold_1256_9
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

8983..11034
-----------------
DNA (2052bp)
protein (684aa)
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5DW85_BACMQ
rifcsphigho2_02_scaffold_1256_10
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

11034..11564
-----------------
DNA (531bp)
protein (177aa)
potassium ABC transporter ATPase (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
potassium ABC transporter ATPase (EC:3.6.3.12)
ATPase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287EBED
rifcsphigho2_02_scaffold_1256_11
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

11579..13789
-----------------
DNA (2211bp)
protein (737aa)
kdpD; potassium-transporting P-type ATPase D chain; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Potassium-transporting P-type ATPase D chain n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NN44_GLOVI
kdpD; potassium-transporting P-type ATPase D chain
rifcsphigho2_02_scaffold_1256_12
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(13796..15112)
-----------------
DNA (1317bp)
protein (439aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5AFB9
amino acid transporter Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
amino acid transporter
rifcsphigho2_02_scaffold_1256_13
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

15188..16537
-----------------
DNA (1350bp)
protein (450aa)
diaminopimelate decarboxylase (EC:4.1.1.20) Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase id=3740070 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria rbh
rifcsphigho2_02_scaffold_1256_14
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(16710..18359)
-----------------
DNA (1650bp)
protein (550aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3) Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M4Y9_9CYAN rbh
rifcsphigho2_02_scaffold_1256_15
unknown

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18554..18682
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1256_16
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

18679..19914
-----------------
DNA (1236bp)
protein (412aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PQB7_9CLOT rbh
Na+ dependent nucleoside transporter domain protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Na+ dependent nucleoside transporter domain protein
rifcsphigho2_02_scaffold_1256_17
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(19906..20550)
-----------------
DNA (645bp)
protein (215aa)
Sulfotransferase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XD26_9CHRO
sulfotransferase-like protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
sulfotransferase
rifcsphigho2_02_scaffold_1256_18
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(20855..21763)
-----------------
DNA (909bp)
protein (303aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=2 Tax=mine drainage metagenome RepID=T0ZU80_9ZZZZ
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
rifcsphigho2_02_scaffold_1256_19
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(21806..23629)
-----------------
DNA (1824bp)
protein (608aa)
2-oxoacid--ferredoxin oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI0003734FCB
2-oxoacid--ferredoxin oxidoreductase, alpha subunit
rifcsphigho2_02_scaffold_1256_20
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(23769..24125)
-----------------
DNA (357bp)
protein (119aa)
paaD; metal-sulfur cluster biosynthetic enzyme Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Uncharacterized protein id=5032495 bin=GWA2_Elusimicrobia_66_18 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
paaD; putative metal-sulfur cluster biosynthetic enzyme
rifcsphigho2_02_scaffold_1256_21
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(24140..24595)
-----------------
DNA (456bp)
protein (152aa)
SUF system FeS assembly protein, NifU family; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
iscU; NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins id=24398228 bin=RBG_19FT_COMBO_GAL15_69_19 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
NifU family SUF system FeS assembly protein
rifcsphigho2_02_scaffold_1256_22
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(24621..25910)
-----------------
DNA (1290bp)
protein (430aa)
cysteine desulfurase (EC:2.8.1.7); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
cysteine desulfurase (EC:2.8.1.7)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
rifcsphigho2_02_scaffold_1256_23
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(25926..26243)
-----------------
DNA (318bp)
protein (106aa)
Putative ferredoxin n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I491_CALAS
putative ferredoxin; K05710 dioxygenase ferredoxin subunit Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
putative ferredoxin
rifcsphigho2_02_scaffold_1256_24
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(26246..27499)
-----------------
DNA (1254bp)
protein (418aa)
Iron-regulated ABC transporter permease protein SufD n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZN2_RUBXD
Iron-regulated ABC transporter permease SufD; K09015 Fe-S cluster assembly protein SufD Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Iron-regulated ABC transporter permease SufD
rifcsphigho2_02_scaffold_1256_25
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(27541..28941)
-----------------
DNA (1401bp)
protein (467aa)
FeS assembly protein SufB Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
FeS assembly protein SufB id=1250294 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
sufB; component of SufBCD complex
rifcsphigho2_02_scaffold_1256_26
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(28952..29740)
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ10_9BACT
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
FeS assembly ATPase SufC
rifcsphigho2_02_scaffold_1256_27
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(29848..30312)
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037AA286
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
BadM/Rrf2 family transcriptional regulator
rifcsphigho2_02_scaffold_1256_28
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

30578..30988
-----------------
DNA (411bp)
protein (137aa)
Iron-sulfur cluster assembly protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X149_BACMS
iscA; iron-sulfur cluster assembly protein; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
iscA; iron-sulfur cluster assembly protein
rifcsphigho2_02_scaffold_1256_29
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

31130..31621
-----------------
DNA (492bp)
protein (164aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
rifcsphigho2_02_scaffold_1256_30
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

31624..33351
-----------------
DNA (1728bp)
protein (576aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Displaying items 1-30 of 33 in total

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