ggKbase home page

rifcsphigho2_02_scaffold_993

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_993_1
unknown

Not on your lists

comp(84..725)
DNA (642bp) protein (214aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_2
unknown

Not on your lists

comp(972..1532)
DNA (561bp) protein (187aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_3
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1626..2618)
DNA (993bp) protein (331aa)
phosphate uptake regulator Tax=AR17
phosphate uptake regulator id=5045865 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_993_4
unknown

Not on your lists

2792..3229
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_5

Not on your lists


comp(3445..4875)
DNA (1431bp) protein (477aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1579377 species="Archaea.;" sour
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=5240603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_993_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5317..5709)
DNA (393bp) protein (131aa)
hypothetical protein id=5041672 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
vitamin K epoxide reductase complex subunit 1-like protein 1-like
rifcsphigho2_02_scaffold_993_7
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5722..6354)
DNA (633bp) protein (211aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTC7_SIDLE id=5223800 bin=16ft_combo_ws3_JS1 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dinucleotide-binding protein; K06988 Tax=GWB2_Ignavibacteria_35_6b_curated
NADP oxidoreductase coenzyme F420-dependent
rifcsphigho2_02_scaffold_993_8
unknown

Not on your lists

6596..7069
DNA (474bp) protein (158aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_9
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7073..7855)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZJL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS00516.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
glycerophosphoryl diester phosphodiesterase
rifcsphigho2_02_scaffold_993_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7922..8713)
DNA (792bp) protein (264aa)
Chromosome partitioning protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK3_9BACT
Chromosome partitioning protein Tax=AR11
parA3; ATPase
rifcsphigho2_02_scaffold_993_11
unknown

Not on your lists

8851..12831
DNA (3981bp) protein (1327aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13002..13733)
DNA (732bp) protein (244aa)
hypothetical protein id=5048336 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_993_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13726..14379)
DNA (654bp) protein (218aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_993_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

15009..15929
DNA (921bp) protein (307aa)
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=RBG_13_Woesearchaeota_36_6_curated
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB
rifcsphigho2_02_scaffold_993_15
unknown

Not on your lists

15945..16703
DNA (759bp) protein (253aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_16

Not on your lists

comp(16691..17023)
DNA (333bp) protein (111aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=5043579 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:KHO46555.1}; EC=2.1.1.63 {ECO:0000313|EMBL:KHO46555.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
methylated-DNA/protein-cysteine methyltransferase
rifcsphigho2_02_scaffold_993_17
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17062..17643)
DNA (582bp) protein (194aa)
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methylase Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_993_18
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(17636..18223)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003669D41
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_993_19
unknown

Not on your lists

18293..18868
DNA (576bp) protein (192aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_20

Not on your lists

comp(18883..19803)
DNA (921bp) protein (307aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase NADPH {ECO:0000313|EMBL:KHO46790.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KHO46790.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Thioredoxin reductase TrxB-3
rifcsphigho2_02_scaffold_993_21
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19867..20595)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000371D639
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK72633.1}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arco
rifcsphigho2_02_scaffold_993_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(20861..21652)
DNA (792bp) protein (264aa)
Transposase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW13_METCG
integrase catalytic subunit Tax=CG_Woesearch_02
IS481 family transposase
rifcsphigho2_02_scaffold_993_23
unknown

Not on your lists

21858..22097
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_24
unknown

Not on your lists

comp(22084..22257)
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_25

Not on your lists

22333..24399
DNA (2067bp) protein (689aa)
ATP-binding protein {ECO:0000313|EMBL:KHO49681.1}; EC=6.3.5.4 {ECO:0000313|EMBL:KHO49681.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
ATP-binding protein (EC:6.3.5.4) id=5048680 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP binding protein
rifcsphigho2_02_scaffold_993_26
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24394..25248)
DNA (855bp) protein (285aa)
Uncharacterized membrane protein id=5042271 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsphigho2_02_scaffold_993_27
unknown

Not on your lists

comp(25241..25963)
DNA (723bp) protein (241aa)

This feature has no annotations

rifcsphigho2_02_scaffold_993_28
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26018..26452
DNA (435bp) protein (145aa)
Histidine triad (HIT) protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LPV4_HALO1
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ACY16991.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Hali
rifcsphigho2_02_scaffold_993_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(26475..27209)
DNA (735bp) protein (245aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator TrmB id=5048445 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_993_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

27419..29359
DNA (1941bp) protein (647aa)
putative glycosyltransferase (group 1) (EC:2.4.1.-) Tax=CG_Woesearch_02
Putative glycosyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVT5_METPS
putative glycosyltransferase
Displaying items 1-30 of 48 in total

View Taxonomy