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rifcsphigho2_02_scaffold_3886

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3886_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3..551)
DNA (549bp) protein (183aa)
Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_3886_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(628..759)
DNA (132bp) protein (44aa)
coiled-coil Tax=AR10
rifcsphigho2_02_scaffold_3886_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

886..1197
DNA (312bp) protein (104aa)
transcriptional regulator PadR family transcriptional regulator id=5048283 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional regulator PadR family transcriptional regulator Tax=AR18
transcriptional regulator PadR family transcriptional regulator
rifcsphigho2_02_scaffold_3886_4
unknown

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comp(1206..1490)
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3886_5

Not on your lists

1621..2307
DNA (687bp) protein (229aa)
ABC transporter, ATPase subunit id=5800240 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ABC transporter, ATPase subunit {ECO:0000313|EMBL:AJF61571.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
ABC transporter ATP-binding protein
rifcsphigho2_02_scaffold_3886_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

2317..3588
DNA (1272bp) protein (424aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Putative uncharacterized protein id=5800241 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_3886_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3592..4815
DNA (1224bp) protein (408aa)
Uncharacterized protein id=5800242 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_3886_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4812..6023
DNA (1212bp) protein (404aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=AR11
Putative uncharacterized protein id=5800243 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_3886_9

Not on your lists

6067..7635
DNA (1569bp) protein (523aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:EQB64063.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacter
L-aspartate oxidase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LIF8_9BACT
nadB; L-aspartate oxidase
rifcsphigho2_02_scaffold_3886_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7684..9900
DNA (2217bp) protein (739aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=AR11
DNA topoisomerase I id=5800162 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA topoisomerase 1
rifcsphigho2_02_scaffold_3886_11
unknown

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comp(9892..10260)
DNA (369bp) protein (123aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3886_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

10267..11964
DNA (1698bp) protein (566aa)
serine protease-like protein; K06870 uncharacterized protein Tax=CG_Woesearch_01
serine protease; K06870 uncharacterized protein id=5049207 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
peptidase S16 lon domain protein
rifcsphigho2_02_scaffold_3886_13
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

11961..12842
DNA (882bp) protein (294aa)
pfkB-3; ATP-dependent phosphofructokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=CG_Elusi_03
pfkB-3; ATP-dependent phosphofructokinase (EC:2.7.1.15)
Putative ATP-dependent phosphofructokinase (PFK-B family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1B5_UNCMA
rifcsphigho2_02_scaffold_3886_14
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

12844..13473
DNA (630bp) protein (210aa)
Alanine racemase domain protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CG86_KOSOT
alanine racemase domain protein
Alanine racemase domain protein {ECO:0000313|EMBL:ACR79527.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
rifcsphigho2_02_scaffold_3886_15
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

13514..14602
DNA (1089bp) protein (363aa)
Radical SAM domain-containing protein id=5799836 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Radical SAM domain-containing protein Tax=AR15
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_3886_16
unknown

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comp(14573..15049)
DNA (477bp) protein (159aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3886_17

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15189..16454
DNA (1266bp) protein (422aa)
putative threonylcarbamoyladenosine tRNA methylthiotransferase (EC:2.-.-.-)
MiaB-like tRNA modifying enzyme id=5800532 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
MiaB-like protein tRNA modifying enzyme {ECO:0000313|EMBL:AJF61863.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_3886_18
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(16462..16923)
DNA (462bp) protein (154aa)
Dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] id=7200627 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RIFOXYC12_FULL_TA06_54_24_curated
dfrA; dihydrofolate reductase DfrA (EC:1.5.1.3)
rifcsphigho2_02_scaffold_3886_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16920..17786)
DNA (867bp) protein (289aa)
Thymidylate synthase id=5799573 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
Thymidylate synthase Tax=AR15
thyA; thymidylate synthase rbh
rifcsphigho2_02_scaffold_3886_20
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

17879..18421
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B8932
acetyltransferase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
hexapaptide repeat-containing transferase
rifcsphigho2_02_scaffold_3886_21
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18411..19913
DNA (1503bp) protein (501aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K7C9_CLOPA
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Tax=BJP_IG2069_Desfulfarculales_53_13
rifcsphigho2_02_scaffold_3886_22
Jeotgalicoccus sp. 13MG44_air, Jeotgalicoccus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19910..20515)
DNA (606bp) protein (202aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1461582 species="Bacteria; Firmicutes; Bacilli; Bacillales; Jeotgalicoccus.;" source="Jeotgali
superoxide dismutase n=1 Tax=Salinicoccus carnicancri RepID=UPI00031D0C6C
sodA; Superoxide dismutase
rifcsphigho2_02_scaffold_3886_23

Not on your lists

comp(20534..21121)
DNA (588bp) protein (196aa)
erpA; iron-sulfur cluster insertion protein erpA id=18248539 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Iron-sulfur cluster insertion protein erpA {ECO:0000313|EMBL:KHO47374.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_02_scaffold_3886_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21187..23820)
DNA (2634bp) protein (878aa)
P-type HAD superfamily ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5041728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
P-type HAD superfamily ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=AR4
calcium-translocating P-type ATPase
rifcsphigho2_02_scaffold_3886_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

24093..24341
DNA (249bp) protein (83aa)
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae Tax=CG_Woesearch_02
50S ribosomal protein L37Ae id=5799816 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L37Ae
rifcsphigho2_02_scaffold_3886_26

Not on your lists

24334..24471
DNA (138bp) protein (46aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S17826 {ECO:0000313|EMBL:GAG16421.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5103032 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_3886_27
unknown

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24468..24731
DNA (264bp) protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3886_28
CG_Woesearch_02, Woesearchaeota, Archaea

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24694..25008
DNA (315bp) protein (105aa)
prefoldin subunit beta; K04798 prefoldin beta subunit Tax=CG_Woesearch_02
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta
rifcsphigho2_02_scaffold_3886_29
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

25020..25268
DNA (249bp) protein (83aa)
Uncharacterized protein conserved in archaea id=5799820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein conserved in archaea Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_3886_30
unknown

Not on your lists

comp(25265..25573)
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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