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rifcsphigho2_02_scaffold_8212

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_8212_1
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(208..789)
DNA (582bp) protein (194aa)
glutamine amidotransferase subunit PdxT; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00037BCED8
Glutamine amidotransferase subunit pdxT
rifcsphigho2_02_scaffold_8212_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(793..1674)
DNA (882bp) protein (294aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=5094819 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
pyridoxine biosynthesis protein (EC:4.-.-.-)
pyridoxine biosynthesis glutamine amidotransferase, synthase subunit Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rifcsphigho2_02_scaffold_8212_3
unknown

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1707..2789
DNA (1083bp) protein (361aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8212_4
unknown

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2844..3929
DNA (1086bp) protein (362aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8212_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3930..4598)
DNA (669bp) protein (223aa)
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=RBG_13_Woesearchaeota_36_6_curated
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5048460 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
fibrillarin
rifcsphigho2_02_scaffold_8212_6

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comp(4591..5442)
DNA (852bp) protein (284aa)
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45493.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
pre-mRNA processing ribonucleoprotein
rifcsphigho2_02_scaffold_8212_7
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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5526..5840
DNA (315bp) protein (105aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=16545 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RBG_13_Nitrospirae_43_8_curated
CutA1 divalent ion tolerance protein
rifcsphigho2_02_scaffold_8212_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5827..7476
DNA (1650bp) protein (550aa)
ABC-1 domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVJ5_ACEAZ
ABC-1 domain protein Tax=AR11
ABC transporter
rifcsphigho2_02_scaffold_8212_9
unknown

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7466..7762
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8212_10
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

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comp(7752..8417)
DNA (666bp) protein (222aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
Putative uridylate kinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F520_9DELT
putative uridylate kinase
rifcsphigho2_02_scaffold_8212_11

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comp(8414..8764)
DNA (351bp) protein (117aa)
hypothetical protein id=5048451 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45485.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
permease
rifcsphigho2_02_scaffold_8212_12

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comp(8761..9114)
DNA (354bp) protein (118aa)
hypothetical protein id=5048450 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45484.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_8212_13

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comp(9134..10714)
DNA (1581bp) protein (527aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=5048449 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KHO45483.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
SecD/SecF/SecDF export membrane protein
rifcsphigho2_02_scaffold_8212_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10704..11600)
DNA (897bp) protein (299aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=AR11
Protein-export membrane protein SecF
rifcsphigho2_02_scaffold_8212_15

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11726..12355
DNA (630bp) protein (210aa)
Uncharacterized protein id=5800233 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61564.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rhomboid family protein
rifcsphigho2_02_scaffold_8212_16
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

12359..12712
DNA (354bp) protein (118aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_8212_17

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comp(12709..13299)
DNA (591bp) protein (197aa)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methyltransferase small {ECO:0000313|EMBL:AJF61561.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
methyltransferase small
rifcsphigho2_02_scaffold_8212_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13317..13988)
DNA (672bp) protein (224aa)
id=5047432 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
Displaying 18 items

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