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rifcsphigho2_02_scaffold_1308

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1308_1
RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1..1329)
DNA (1329bp) protein (443aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated
Phosphoenolpyruvate synthase n=1 Tax=uncultured bacterium RepID=K2FYL8_9BACT
phosphoenolpyruvate synthase
rifcsphigho2_02_scaffold_1308_2

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comp(1326..2672)
DNA (1347bp) protein (449aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=136458 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:KKS33370.1}; TaxID=1618926 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
phosphoenolpyruvate synthase
rifcsphigho2_02_scaffold_1308_3
GWA2_OD1_42_15, Kuenenbacteria, Parcubacteria, Bacteria

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comp(2669..3307)
DNA (639bp) protein (213aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B2Y7_9BACT
Putative phosphoenolpyruvate synthase {ECO:0000313|EMBL:KKS41632.1}; TaxID=1618677 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kuenenbacteria) bacterium GW2011_GWA2_42_15.;"
rifcsphigho2_02_scaffold_1308_4
unknown

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comp(3333..4145)
DNA (813bp) protein (271aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_5
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4194..4778)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B8932
Acetyltransferase {ECO:0000313|EMBL:KJS14501.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
hypothetical protein
rifcsphigho2_02_scaffold_1308_6
unknown

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comp(4812..5717)
DNA (906bp) protein (302aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_7
unknown

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comp(5831..6343)
DNA (513bp) protein (171aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_8
unknown

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6535..7308
DNA (774bp) protein (258aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_9
CG_Woesearch_02, Woesearchaeota, Archaea

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7331..7858
DNA (528bp) protein (176aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=CG_Woesearch_02
cmk; cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YP29_9BACT
rifcsphigho2_02_scaffold_1308_10
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

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7957..9183
DNA (1227bp) protein (409aa)
Fumarylacetoacetase family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FND2_SORC5
fumarylacetoacetate (FAA) hydrolase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
faa; fumarylacetoacetase
rifcsphigho2_02_scaffold_1308_11
CG_Woesearch_02, Woesearchaeota, Archaea

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9271..9921
DNA (651bp) protein (217aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=CG_Woesearch_02
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_1308_12
CG_Woesearch_02, Woesearchaeota, Archaea

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9967..11076
DNA (1110bp) protein (370aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_02
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsphigho2_02_scaffold_1308_13

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11073..11252
DNA (180bp) protein (60aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579365 species="Archaea.;" source="a
rifcsphigho2_02_scaffold_1308_14

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11255..11737
DNA (483bp) protein (161aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_1308_15
unknown

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11744..12388
DNA (645bp) protein (215aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_16
CG_Woesearch_02, Woesearchaeota, Archaea

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12473..13216
DNA (744bp) protein (248aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_02
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L11
rifcsphigho2_02_scaffold_1308_17

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13251..14471
DNA (1221bp) protein (407aa)
Na+/H+-exchanging protein id=5048648 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Na+/H+-exchanging protein {ECO:0000313|EMBL:KHO45311.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Na+/H+-exchanging protein
rifcsphigho2_02_scaffold_1308_18
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14632..16215)
DNA (1584bp) protein (528aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HUM8_9EURY
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ELZ88191.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans AT
phosphoglycerate dehydrogenase
rifcsphigho2_02_scaffold_1308_19
GWC2_OD1_38_7, Parcubacteria, Bacteria

Not on your lists

16327..16980
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ78665.1}; Flags: Fragment;; TaxID=1618920 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_38_7.;"
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_1308_20
unknown

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17051..17737
DNA (687bp) protein (229aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_21
CG_Elusi_03, Elusimicrobia, Bacteria

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17805..18335
DNA (531bp) protein (177aa)
nucleotidyltransferase/DNA-binding domain-containing protein Tax=CG_Elusi_03
rifcsphigho2_02_scaffold_1308_22
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists

18343..18678
DNA (336bp) protein (112aa)
Putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BM34_9EURY
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
rifcsphigho2_02_scaffold_1308_23

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comp(18783..19589)
DNA (807bp) protein (269aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1457870 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein conserved in archaea
rifcsphigho2_02_scaffold_1308_24
unknown

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19808..20017
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_25
CG_Woesearch_02, Woesearchaeota, Archaea

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20284..20454
DNA (171bp) protein (57aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4541659 Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_1308_26

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20451..20753
DNA (303bp) protein (101aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46570.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_1308_27
unknown

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20753..20911
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1308_28

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comp(20926..22521)
DNA (1596bp) protein (532aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AJF62792.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_1308_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(22707..23627)
DNA (921bp) protein (307aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72706.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus
rifcsphigho2_02_scaffold_1308_30
CG_Woesearch_02, Woesearchaeota, Archaea

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23682..25355
DNA (1674bp) protein (558aa)
hypothetical protein Tax=CG_Woesearch_02
Histone acetyltransferase Elp3 like protein id=5800668 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histone acetyltransferase Elp3 like protein
Displaying items 1-30 of 46 in total

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