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rifcsphigho2_02_scaffold_10228

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10228_1
unknown

Not on your lists

comp(1..204)
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10228_2
R_OP11_Gottesmanbacteria_39_14, Gottesmanbacteria, Microgenomates, Bacteria

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comp(311..823)
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_14_curated
Uncharacterized protein id=3494403 bin=GWF2_Bacteroidetes_41_31 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
rifcsphigho2_02_scaffold_10228_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(820..2346)
DNA (1527bp) protein (509aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Clostridium intestinale URNW RepID=U2Q2Y7_9CLOT
lysyl-tRNA synthetase
rifcsphigho2_02_scaffold_10228_4
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2330..3076)
DNA (747bp) protein (249aa)
Lysine decarboxylase n=1 Tax=Clostridium sp. CAG:288 RepID=R7FNV2_9CLOT
Lysine decarboxylase {ECO:0000313|EMBL:CDE15382.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp
arginine/lysine/ornithine decarboxylase
rifcsphigho2_02_scaffold_10228_5

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comp(3122..3934)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E8D4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE05792.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_02_scaffold_10228_6
RHI_Saccharibacteria_47_16b, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3924..4859)
DNA (936bp) protein (312aa)
Histone deacetylase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHB1_KOSOT
histone deacetylase superfamily protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_47_16b_curated
Histone deacetylase
rifcsphigho2_02_scaffold_10228_7
unknown

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comp(4856..5770)
DNA (915bp) protein (305aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10228_8
unknown

Not on your lists

comp(5767..6228)
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10228_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6287..6730)
DNA (444bp) protein (148aa)
Transcriptional regulator, AsnC family id=5800646 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcriptional regulator, AsnC family Tax=AR15
Lrp/AsnC family transcription regulator
rifcsphigho2_02_scaffold_10228_10

Not on your lists

6926..7894
DNA (969bp) protein (323aa)
AsnC family transcriptional regulator id=5045721 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
AsnC family transcriptional regulator {ECO:0000313|EMBL:KHO54388.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
ArsR family transcriptional regulator
rifcsphigho2_02_scaffold_10228_11

Not on your lists

comp(7898..8800)
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51311.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsphigho2_02_scaffold_10228_12

Not on your lists

comp(8931..9587)
DNA (657bp) protein (219aa)
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46975.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_10228_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

9703..10704
DNA (1002bp) protein (334aa)
DNA polymerase beta domain protein region Tax=CG_Woesearch_01
DNA polymerase beta domain protein region id=5046032 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta protein
rifcsphigho2_02_scaffold_10228_14
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

10748..11359
DNA (612bp) protein (204aa)
tRNA wybutosine-synthesizing protein 3 homolog Tax=CG_Pacearch_04
tRNA methylase id=5046019 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_10228_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11393..12430)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=AR11
Displaying 15 items

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