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rifcsphigho2_02_scaffold_17407

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_17407_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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3..251
DNA (249bp) protein (83aa)
hypothetical protein
id=5050163 Tax=RBG_16_Micrarchaeota_49_10_curated
id=5103473 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_17407_2

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244..546
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP2_9EURY id=5103474 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50258.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsphigho2_02_scaffold_17407_3
unknown

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comp(564..1091)
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17407_4
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(1095..1889)
DNA (795bp) protein (265aa)
Glycoside hydrolase family 25 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ID12_ACIB4
glycoside hydrolase family 25
Glycoside hydrolase family 25 {ECO:0000313|EMBL:ADD09223.1}; Glycosyl hydrolases family 25, putative {ECO:0000313|EMBL:EDY35839.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" so
rifcsphigho2_02_scaffold_17407_5
unknown

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comp(1897..2991)
DNA (1095bp) protein (365aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17407_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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3035..3337
DNA (303bp) protein (101aa)
id=5103333 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_02_scaffold_17407_7
AR17, Woesearchaeaota, DPANN, Archaea

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3379..3636
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Halorubrum RepID=M0DM60_9EURY
Putative uncharacterized protein Tax=AR17
hypothetical protein
rifcsphigho2_02_scaffold_17407_8
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3636..4025
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LL73_9EURY
hypothetical protein; K07062 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
putative nucleic acid-binding protein
rifcsphigho2_02_scaffold_17407_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4083..5090)
DNA (1008bp) protein (336aa)
RNA methylase, NOL1/NOP2/sun family Tax=AR11
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
rifcsphigho2_02_scaffold_17407_10
unknown

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comp(5256..5483)
DNA (228bp) protein (76aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17407_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5569..7011)
DNA (1443bp) protein (481aa)
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=CG_Woesearch_02
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5042284 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_02_scaffold_17407_12
CG_Woesearch_03, Woesearchaeota, Archaea

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7085..8155
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQ52_9BACT
mechanosensitive ion channel protein MscS; K16052 MscS family membrane protein YnaI Tax=CG_Woesearch_03
MscS mechanosensitive ion channel
rifcsphigho2_02_scaffold_17407_13

Not on your lists

comp(8166..8420)
DNA (255bp) protein (85aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A6H2_METM6
Marine sediment metagenome DNA, contig: S01H4_S01645 {ECO:0000313|EMBL:GAG86037.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
addiction module antitoxin
rifcsphigho2_02_scaffold_17407_14
unknown

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comp(8421..8657)
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17407_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8685..8906)
DNA (222bp) protein (74aa)
glutamyl-tRNA(Gln) amidotransferase, subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=CG_Woesearch_02
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit D id=5800300 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_17407_16
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9014..9970)
DNA (957bp) protein (319aa)
glutamyl-tRNA(Gln) amidotransferase, subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=CG_Woesearch_02
Glutamyl-tRNA(Gln) amidotransferase subunit D id=5800300 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsphigho2_02_scaffold_17407_17
unknown

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comp(9992..10087)
DNA (96bp) protein (32aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17407_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10146..11354)
DNA (1209bp) protein (403aa)
radical SAM protein; K06935 Tax=CG_Woesearch_02
radical SAM protein; K06935 id=5048707 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_17407_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

11573..12424
DNA (852bp) protein (284aa)
ficd, hype, unq3041; FIC domain containing (EC:2.7.7.n1) Tax=CG_Pacearch_03
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH id=5103001 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_17407_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12564..14852)
DNA (2289bp) protein (763aa)
AAA family ATPase, CDC48 subfamily Tax=AR15
AAA family ATPase, CDC48 subfamily id=5799990 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily
rifcsphigho2_02_scaffold_17407_21
unknown

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comp(14948..15385)
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17407_22

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comp(15424..19956)
DNA (4533bp) protein (1511aa)
hypothetical protein id=5044656 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46181.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Ig-like domain-containing protein
rifcsphigho2_02_scaffold_17407_23
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20067..20585)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:AJY45583.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytic
Hypothetical protein
probable cell surface glycoprotein id=24623340 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Displaying 23 items

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