ggKbase home page

rifcsphigho2_02_scaffold_5406

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_5406_1
unknown

Not on your lists

2..598
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_2
unknown

Not on your lists

595..1299
-----------------
DNA (705bp)
protein (235aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_trna_1
unknown

Not on your lists

comp(1317..1456)
-----------------
DNA (140bp)
transferRNA
rifcsphigho2_02_scaffold_5406_3
unknown

Not on your lists

comp(1500..1712)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_4
unknown

Not on your lists

comp(1816..1959)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_5
unknown

Not on your lists

comp(1956..2180)
-----------------
DNA (225bp)
protein (75aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY id=5103084 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Like-Sm ribonucleoprotein core
rifcsphigho2_02_scaffold_5406_6
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2325..2498
-----------------
DNA (174bp)
protein (58aa)
rifcsphigho2_02_scaffold_5406_7

Not on your lists


2500..2955
-----------------
DNA (456bp)
protein (152aa)
ASCG--Transcription--elongation--factor--Spt5
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003807E84
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_5406_8
Bacillus manliponensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2990..3763
-----------------
DNA (774bp)
protein (258aa)
oxidoreductase n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI0003827F4F
oxidoreductase, short-chain dehydrogenase/reductase family
rifcsphigho2_02_scaffold_5406_9
unknown

Not on your lists


3805..4512
-----------------
DNA (708bp)
protein (236aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
LSU ribosomal protein L11P
rifcsphigho2_02_scaffold_5406_10

Not on your lists

comp(4547..6289)
-----------------
DNA (1743bp)
protein (581aa)
putative hemolysin id=5046334 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_5406_11

Not on your lists

comp(6270..6524)
-----------------
DNA (255bp)
protein (85aa)
rifcsphigho2_02_scaffold_5406_12

Not on your lists

comp(6648..7559)
-----------------
DNA (912bp)
protein (304aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
rifcsphigho2_02_scaffold_5406_13
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7620..8273
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_5406_14
unknown

Not on your lists

8349..8660
-----------------
DNA (312bp)
protein (104aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E
rifcsphigho2_02_scaffold_5406_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

8713..8898
-----------------
DNA (186bp)
protein (62aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27e
rifcsphigho2_02_scaffold_5406_16

Not on your lists

8898..9689
-----------------
DNA (792bp)
protein (264aa)
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 2 subunit alpha
rifcsphigho2_02_scaffold_5406_17
unknown

Not on your lists

9671..9829
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_18

Not on your lists

9855..10607
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_5406_19
unknown

Not on your lists

10612..10803
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_20
unknown

Not on your lists

10835..11041
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11064..11450)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUB7_9ARCH
rifcsphigho2_02_scaffold_5406_22
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11443..11655)
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATT2_9ARCH
rifcsphigho2_02_scaffold_5406_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11719..11982)
-----------------
DNA (264bp)
protein (88aa)
rifcsphigho2_02_scaffold_5406_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12083..12412
-----------------
DNA (330bp)
protein (110aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369AAB9
hypothetical protein
rifcsphigho2_02_scaffold_5406_25
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

12744..14054
-----------------
DNA (1311bp)
protein (437aa)
rifcsphigho2_02_scaffold_5406_26

Not on your lists

comp(14034..15314)
-----------------
DNA (1281bp)
protein (427aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP protein
rifcsphigho2_02_scaffold_5406_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15434..16381)
-----------------
DNA (948bp)
protein (316aa)
id=5050668 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_5406_28
unknown

Not on your lists

16476..16985
-----------------
DNA (510bp)
protein (170aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5406_29
unknown

Not on your lists

comp(16982..18007)
-----------------
DNA (1026bp)
protein (342aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy