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rifcsphigho2_02_scaffold_1480

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_1480_1
unknown

Not on your lists

1..144
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_2
unknown

Not on your lists

137..652
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_3
unknown

Not on your lists

comp(635..1495)
-----------------
DNA (861bp)
protein (287aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1730..2035)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein
id=5103552 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_1480_5
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2032..2271)
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein
id=5103553 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_1480_6
unknown

Not on your lists

comp(2371..2790)
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_7
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(3205..4260)
-----------------
DNA (1056bp)
protein (352aa)
RHS repeat-associated core domain-containing protein id=5102320 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
RHS repeat-associated core domain protein
rifcsphigho2_02_scaffold_1480_8
unknown

Not on your lists

comp(4290..4388)
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_9

Not on your lists

comp(4513..5004)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035DE931
rifcsphigho2_02_scaffold_1480_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4997..5548)
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037902D9
rifcsphigho2_02_scaffold_1480_11

Not on your lists

comp(5600..5986)
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003748E1E
hypothetical protein
rifcsphigho2_02_scaffold_1480_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6177..6749)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DAC95
Nucleotidyltransferase family protein
rifcsphigho2_02_scaffold_1480_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6956..8455)
-----------------
DNA (1500bp)
protein (500aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
inosine 5''''-monophosphate dehydrogenase n=3 Tax=cellular organisms RepID=UPI00036D65F5
rifcsphigho2_02_scaffold_1480_14
unknown

Not on your lists

8552..9877
-----------------
DNA (1326bp)
protein (442aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AM50_METOI id=5102974 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA-metabolising metallo-beta-lactamase
rifcsphigho2_02_scaffold_1480_15

Not on your lists

9877..10173
-----------------
DNA (297bp)
protein (99aa)
Putative uncharacterized protein id=5800618 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_1480_16
unknown

Not on your lists

10275..11483
-----------------
DNA (1209bp)
protein (403aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CF06F
Metallophosphoesterase
rifcsphigho2_02_scaffold_1480_17
unknown

Not on your lists

11477..13525
-----------------
DNA (2049bp)
protein (683aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC protein
rifcsphigho2_02_scaffold_1480_16S_1
unknown

Not on your lists

14360..15940
-----------------
DNA (1581bp)
rifcsphigho2_02_scaffold_1480_18
unknown

Not on your lists

19217..19762
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_19
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

20573..21187
-----------------
DNA (615bp)
protein (205aa)
RNA polymerase sigma factor SigA n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YES0_DICT6
rpoD; RNA polymerase sigma factor RpoD
rifcsphigho2_02_scaffold_1480_20
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(21184..22161)
-----------------
DNA (978bp)
protein (326aa)
ASCG--tRNA--N6-adenosine--threonylcarbamoyltransferase
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003824DB2
putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein
rifcsphigho2_02_scaffold_1480_21

Not on your lists

comp(22210..22617)
-----------------
DNA (408bp)
protein (136aa)
DoxX family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV8_9BACT id=5103609 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DoxX family protein
rifcsphigho2_02_scaffold_1480_22
unknown

Not on your lists

comp(22628..23014)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_23
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23091..23699)
-----------------
DNA (609bp)
protein (203aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4A9Q5_CLOBO
rifcsphigho2_02_scaffold_1480_24
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

23762..24217
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E83DE
NTP pyrophosphohydrolase
rifcsphigho2_02_scaffold_1480_25
unknown

Not on your lists

24210..24431
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_26
unknown

Not on your lists

24513..25445
-----------------
DNA (933bp)
protein (311aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_27
unknown

Not on your lists

comp(25478..26671)
-----------------
DNA (1194bp)
protein (398aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_1480_28
unknown

Not on your lists

comp(26906..27751)
-----------------
DNA (846bp)
protein (282aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1480_29
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

27810..28532
-----------------
DNA (723bp)
protein (241aa)
Oxidoreductase FAD-binding region n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXG6_9AQUI
oxidoreductase
Displaying items 1-30 of 68 in total

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