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rifcsphigho2_02_scaffold_8014

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_8014_1
R_Omnitrophica_44_11, Omnitrophica, Bacteria

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2..823
-----------------
DNA (822bp)
protein (274aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
Strongly similar to cysteine desulfurase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX44_9BACT
cysteine desulfurase family protein
rifcsphigho2_02_scaffold_8014_2
CG_Pacearch_05, Pacearchaeota, Archaea

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820..1044
-----------------
DNA (225bp)
protein (75aa)
transmembrane_regions Tax=CG_Pacearch_05
transmembrane_regions id=5044092 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_8014_3

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1041..2186
-----------------
DNA (1146bp)
protein (382aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=5240775 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJF59767.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_8014_4
AR17, Woesearchaeaota, DPANN, Archaea

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2195..2581
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037CF883
Putative membrane protein Tax=AR17
hypothetical protein
rifcsphigho2_02_scaffold_8014_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2583..2903
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YKB9_9BACT
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_02_scaffold_8014_6
unknown

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comp(3163..3933)
-----------------
DNA (771bp)
protein (257aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_7
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

4157..4408
-----------------
DNA (252bp)
protein (84aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XFF9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
hypothetical protein
rifcsphigho2_02_scaffold_8014_8
unknown

Not on your lists

4856..5392
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_9
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(5561..6124)
-----------------
DNA (564bp)
protein (188aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK7_METFV
signal transduction protein with cbs domains Tax=CG_Pacearch_05
signal transduction protein with cbs domains
rifcsphigho2_02_scaffold_8014_10
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

6437..8035
-----------------
DNA (1599bp)
protein (533aa)
Thermosome, chaperonin Cpn60/TCP-1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRK6_9EURY id=5103700 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
GroL; HSP60 family chaperonin Tax=CG_Pacearch_05
Thermosome, chaperonin Cpn60/TCP-1
rifcsphigho2_02_scaffold_8014_11
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

7980..9098
-----------------
DNA (1119bp)
protein (373aa)
D-alanine--D-alanine ligase {ECO:0000256|SAAS:SAAS00233243}; EC=6.3.2.4 {ECO:0000256|SAAS:SAAS00233243};; TaxID=390874 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" sour
Methyltransferase type 11 n=1 Tax=Thermotoga sp. EMP RepID=J9DSI6_9THEM
Methyltransferase type 11
rifcsphigho2_02_scaffold_8014_12
unknown

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comp(9108..9434)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_13
CG_Pacearch_05, Pacearchaeota, Archaea

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9549..10556
-----------------
DNA (1008bp)
protein (336aa)
hypothetical protein Tax=CG_Pacearch_05
Putative uncharacterized protein id=5800685 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_8014_14
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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10748..11257
-----------------
DNA (510bp)
protein (170aa)
Nuclear protein SET Tax=GWA2_OD1_31_28_partial
SET domain protein id=3623631 bin=GWF2_OP3_38_59 species=alpha proteobacterium HIMB59 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
SET domain-containing protein
rifcsphigho2_02_scaffold_8014_15
unknown

Not on your lists

comp(11469..11969)
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12074..12775
-----------------
DNA (702bp)
protein (234aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
TrmB family transcriptional regulator id=5044157 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_8014_17
unknown

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comp(12991..13320)
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_18
unknown

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comp(14322..14519)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_19
unknown

Not on your lists

comp(14844..15092)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_20

Not on your lists

comp(15217..15693)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AC3F3
Uncharacterized protein {ECO:0000313|EMBL:KKL92851.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Homing endonuclease LAGLIDADG/HNH
rifcsphigho2_02_scaffold_8014_21
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15864..16400)
-----------------
DNA (537bp)
protein (179aa)
LAGLIDADG homing endonuclease Tax=GWA2_OP11_42_12
Homing endonuclease LAGLIDADG/HNH id=5095689 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
homing endonuclease I-ApeII
rifcsphigho2_02_scaffold_8014_22
unknown

Not on your lists

comp(17031..17210)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_23
unknown

Not on your lists

comp(18691..18972)
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_24
unknown

Not on your lists

comp(18995..19117)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8014_25
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19181..19690)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2R1_9ACTN
rifcsphigho2_02_scaffold_8014_26
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(19850..20437)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8U9_9EURY
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
Displaying 26 items

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