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rifcsphigho2_02_scaffold_19469

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_19469_16S_1
unknown

Not on your lists

comp(2..917)
-----------------
DNA (916bp)
rifcsphigho2_02_scaffold_19469_1
unknown

Not on your lists

comp(1236..1475)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_2
unknown

Not on your lists

comp(1477..1872)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_3
unknown

Not on your lists

comp(1832..2317)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_4
unknown

Not on your lists

comp(2310..2546)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(2754..3734)
-----------------
DNA (981bp)
protein (327aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps2p; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Pacearch_05
30S ribosomal protein S2
rifcsphigho2_02_scaffold_19469_6
unknown

Not on your lists

comp(3910..4893)
-----------------
DNA (984bp)
protein (328aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_7
unknown

Not on your lists

comp(4904..5623)
-----------------
DNA (720bp)
protein (240aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(5652..6695)
-----------------
DNA (1044bp)
protein (348aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=CG_Pacearch_05
enolase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39
rifcsphigho2_02_scaffold_19469_9
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6861..7805)
-----------------
DNA (945bp)
protein (315aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Pacearchaeota_35_8_curated
Methylase involved in ubiquinone/menaquinone biosynthesis
type 11 methyltransferase id=7202377 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
rifcsphigho2_02_scaffold_19469_10
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

8071..8583
-----------------
DNA (513bp)
protein (171aa)
hypothetical protein Tax=RBG_19FT_COMBO_OP11_43_10_curated
Uncharacterized protein id=1827174 bin=GWD2_RBX1-related_39_127 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
PrcB C-terminal domain protein
rifcsphigho2_02_scaffold_19469_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(8964..9380)
-----------------
DNA (417bp)
protein (139aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=CG_Pacearch_05
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC43
hypothetical protein
rifcsphigho2_02_scaffold_19469_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(9556..10389)
-----------------
DNA (834bp)
protein (278aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285
ribosomal RNA-processing protein RRP42 Tax=CG_Pacearch_05
Ribosomal RNA-processing protein RRP42
rifcsphigho2_02_scaffold_19469_13
unknown

Not on your lists

comp(10392..10664)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(10666..11373)
-----------------
DNA (708bp)
protein (236aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=CG_Pacearch_05
exosome complex exonuclease Rrp41
rifcsphigho2_02_scaffold_19469_15
unknown

Not on your lists

comp(11407..11607)
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_16
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(11604..12296)
-----------------
DNA (693bp)
protein (231aa)
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5045975 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
exosome complex RNA-binding protein 1; K03679 exosome complex component RRP4 Tax=CG_Pacearch_05
putative exosome complex RNA-binding protein 1
rifcsphigho2_02_scaffold_19469_17
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(12341..13018)
-----------------
DNA (678bp)
protein (226aa)
Predicted exosome subunit n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYB8_METKA
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_05
RNA-associated protein
rifcsphigho2_02_scaffold_19469_18
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(13041..13763)
-----------------
DNA (723bp)
protein (241aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_05
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha
rifcsphigho2_02_scaffold_19469_19
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(13907..14179)
-----------------
DNA (273bp)
protein (91aa)
Marine sediment metagenome DNA, contig: S06H3_S04456 Tax=CG_Pacearch_05
rifcsphigho2_02_scaffold_19469_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

14251..15045
-----------------
DNA (795bp)
protein (265aa)
Undecaprenyl-diphosphatase (EC:3.6.1.27) Tax=CG_Pacearch_02
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000376DEDB
undecaprenyl-diphosphatase UppP
rifcsphigho2_02_scaffold_19469_21
unknown

Not on your lists

15159..15581
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_22
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

15583..15996
-----------------
DNA (414bp)
protein (138aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZJ67_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
rifcsphigho2_02_scaffold_19469_23
unknown

Not on your lists

15977..16750
-----------------
DNA (774bp)
protein (258aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19469_24
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16747..17157)
-----------------
DNA (411bp)
protein (137aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5103518 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
transposase Tax=CG_Pacearch_06
Displaying 25 items

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