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rifcsphigho2_02_scaffold_5213

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5213_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1..186)
-----------------
DNA (186bp)
protein (62aa)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_5213_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

229..996
-----------------
DNA (768bp)
protein (256aa)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_5213_3
unknown

Not on your lists

comp(1159..1467)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5213_4
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1522..2376)
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372C98B
type II secretion system protein; K07333 archaeal flagellar protein FlaJ Tax=CG_Pacearch_03
type II secretion system protein
rifcsphigho2_02_scaffold_5213_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2451..3773)
-----------------
DNA (1323bp)
protein (441aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382D20B
Type II secretion system F domain protein Tax=CG_Pacearch_03
Type II secretion system F domain protein
rifcsphigho2_02_scaffold_5213_6
unknown

Not on your lists

comp(3770..3958)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5213_7
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(4154..5677)
-----------------
DNA (1524bp)
protein (508aa)
gsp-10; putative type II secretion system protein; K07332 archaeal flagellar protein FlaI Tax=CG_Pacearch_02
Type IV secretory pathway, VirB11 component and related ATPase involved in archaeal flagella biosynthesis id=5800481 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
gsp-10; putative type II secretion system protein
rifcsphigho2_02_scaffold_5213_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6034..6579)
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=2175630 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
rifcsphigho2_02_scaffold_5213_9
unknown

Not on your lists

comp(6573..7097)
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5213_10
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(7099..7569)
-----------------
DNA (471bp)
protein (157aa)
Marine sediment metagenome DNA, contig: S01H1_S16493 Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_5213_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(7944..8903)
-----------------
DNA (960bp)
protein (320aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=CG_Pacearch_05
Thioredoxin reductase (TrxB-3) n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A2G0_FERFK id=5103529 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Thioredoxin reductase TrxB-3
rifcsphigho2_02_scaffold_5213_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

9181..9921
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037AFFBE
nuclease (SNase domain protein)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_5213_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

9911..10543
-----------------
DNA (633bp)
protein (211aa)
Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_5213_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

10716..11192
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI00037CAB62
hypothetical protein
hypothetical protein Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_5213_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11352..12650)
-----------------
DNA (1299bp)
protein (433aa)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_5213_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12650..13306)
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=5802427 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
hypothetical protein
rifcsphigho2_02_scaffold_5213_17
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13636..16068)
-----------------
DNA (2433bp)
protein (811aa)
Putative lipoprotein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1K3_9DELT
Putative lipoprotein {ECO:0000313|EMBL:EDM80267.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocys
hypothetical protein
rifcsphigho2_02_scaffold_5213_18
unknown

Not on your lists

comp(16167..16289)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5213_19

Not on your lists

comp(16289..16621)
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2Y0_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KHO53027.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
rifcsphigho2_02_scaffold_5213_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16618..17091)
-----------------
DNA (474bp)
protein (158aa)
DNA polymerase beta domain-containing protein; K07075 id=5041690 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein; K07075 Tax=AR4
DNA polymerase beta domain-containing protein
rifcsphigho2_02_scaffold_5213_21
unknown

Not on your lists

17212..17451
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5213_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(17781..18233)
-----------------
DNA (453bp)
protein (151aa)
Marine sediment metagenome DNA, contig: S01H1_S39863 Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_5213_23
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(18199..19695)
-----------------
DNA (1497bp)
protein (499aa)
Marine sediment metagenome DNA, contig: S01H1_S39863 Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_5213_24
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(19730..20476)
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6C08
transcriptional regulator TrmB Tax=AR6
Transcriptional regulator, TrmB
rifcsphigho2_02_scaffold_5213_25
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20570..21496
-----------------
DNA (927bp)
protein (309aa)
Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RNQ6_XANCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP50091.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
rifcsphigho2_02_scaffold_5213_26
unknown

Not on your lists

21493..22131
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00036E1A6B
rifcsphigho2_02_scaffold_5213_27
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22121..22891
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R5Z7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AKI00113.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;
dehydrogenase
rifcsphigho2_02_scaffold_5213_28
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(22888..24486)
-----------------
DNA (1599bp)
protein (533aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
hypothetical protein
rifcsphigho2_02_scaffold_5213_29
unknown

Not on your lists

24607..25359
-----------------
DNA (753bp)
protein (251aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5213_30
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

25519..26256
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Tax=CG_Pacearch_06
RNA-directed DNA polymerase Reverse transcriptase
Displaying items 1-30 of 45 in total

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