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rifcsphigho2_02_scaffold_17862

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_17862_1
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..299)
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369DF1B
type III restriction system methylase Tax=CG_Maritim_01
type III restriction system methylase
rifcsphigho2_02_scaffold_17862_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

446..661
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=18311514 bin=Haloredivivus tax=Haloredivivus
rifcsphigho2_02_scaffold_17862_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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783..1142
-----------------
DNA (360bp)
protein (120aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAD0_9EURY
putative nucleic acid-binding protein, contains PIN domain Tax=RBG_13_Pacearchaeota_36_9_curated
nucleic acid-binding protein, contains PIN domain protein
rifcsphigho2_02_scaffold_17862_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1159..1386)
-----------------
DNA (228bp)
protein (76aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_17862_5
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(1383..1685)
-----------------
DNA (303bp)
protein (101aa)
Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_17862_6
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(1839..2414)
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
transposase Tax=CG_Pacearch_01
Transposase family protein A
rifcsphigho2_02_scaffold_17862_7
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2562..2906)
-----------------
DNA (345bp)
protein (115aa)
methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTI4_METAC
rifcsphigho2_02_scaffold_17862_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2950..3303)
-----------------
DNA (354bp)
protein (118aa)
bifunctional deaminase-reductase domain-containing protein Tax=CG_Pacearch_06
Bifunctional deaminase-reductase domain protein id=4922377 bin=PER_GWC2_41_7 species=Candidatus Parvarchaeum acidophilus genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Bifunctional deaminase-reductase protein
rifcsphigho2_02_scaffold_17862_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(3310..3456)
-----------------
DNA (147bp)
protein (49aa)
bifunctional deaminase-reductase domain-containing protein Tax=CG_Pacearch_06
dihydrofolate reductase-like protein id=5042048 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rifcsphigho2_02_scaffold_17862_10
unknown

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comp(3494..3859)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17862_trna_2
unknown

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comp(4131..4252)
-----------------
DNA (122bp)
transferRNA
rifcsphigho2_02_scaffold_17862_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4365..5381)
-----------------
DNA (1017bp)
protein (339aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C1C8F
hypothetical protein Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_17862_12
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

5492..5797
-----------------
DNA (306bp)
protein (102aa)
Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_17862_13
unknown

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5963..6334
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17862_14
unknown

Not on your lists

comp(6368..6775)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17862_15
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(7039..7581)
-----------------
DNA (543bp)
protein (181aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos31B6 RepID=Q64AK8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKP93366.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
rifcsphigho2_02_scaffold_17862_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7565..8173)
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA polymerase beta subunit id=16793586 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
rifcsphigho2_02_scaffold_17862_17
unknown

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comp(8390..9358)
-----------------
DNA (969bp)
protein (323aa)

This feature has no annotations

rifcsphigho2_02_scaffold_17862_trna_1
unknown

Not on your lists

comp(9472..9544)
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_17862_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

9838..11544
-----------------
DNA (1707bp)
protein (569aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371BE7E
hypothetical protein
hypothetical protein Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_17862_19

Not on your lists

12178..13371
-----------------
DNA (1194bp)
protein (398aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF01510.1}; TaxID=1457885 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_149_F06.;"
rifcsphigho2_02_scaffold_17862_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

13383..15329
-----------------
DNA (1947bp)
protein (649aa)
Trichohyalin, putative n=1 Tax=Entamoeba histolytica KU27 RepID=M2SBJ1_ENTHI
42.t00003; hypothetical protein Tax=CG_Pacearch_02
protein of unknown function
Displaying 22 items

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