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rifcsphigho2_02_scaffold_1957

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1957_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3..353
-----------------
DNA (351bp)
protein (117aa)
Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_1957_2
unknown

Not on your lists

347..769
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1957_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

766..3516
-----------------
DNA (2751bp)
protein (917aa)
Marine sediment metagenome DNA, contig: S01H1_S33754 Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_1957_4
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3522..4160
-----------------
DNA (639bp)
protein (213aa)
small GTP-binding protein; K06883 Tax=CG_Pacearch_03
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsphigho2_02_scaffold_1957_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4162..4557
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=2 Tax=Methanothermobacter RepID=D9PV24_METTM id=5103011 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein Tax=CG_Pacearch_06
hypothetical protein
rifcsphigho2_02_scaffold_1957_6
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

4733..5137
-----------------
DNA (405bp)
protein (135aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
hypothetical protein; K07163 Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_1957_7
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


5416..6639
-----------------
DNA (1224bp)
protein (408aa)
tRNA CCA-pyrophosphorylase; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=CG_Pacearch_02
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA CCA-pyrophosphorylase
rifcsphigho2_02_scaffold_1957_8
unknown

Not on your lists

comp(6804..7574)
-----------------
DNA (771bp)
protein (257aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1957_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(7577..8365)
-----------------
DNA (789bp)
protein (263aa)
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_1957_10
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

8470..9744
-----------------
DNA (1275bp)
protein (425aa)
Peptidase family M16 id=5800257 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase family M16 Tax=AR15
zinc protease ymxG
rifcsphigho2_02_scaffold_1957_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(9736..10659)
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5044144 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1957_12
unknown

Not on your lists

10706..10816
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1957_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(11009..12904)
-----------------
DNA (1896bp)
protein (632aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EAF14
metal-dependent RNase; K07041 Tax=CG_Pacearch_03
metal-dependent RNase
rifcsphigho2_02_scaffold_1957_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(12920..13576)
-----------------
DNA (657bp)
protein (219aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003791C71
proteasome subunit beta PsmB
rifcsphigho2_02_scaffold_1957_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(13908..16028)
-----------------
DNA (2121bp)
protein (707aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A0D51
smc domain protein; K03546 exonuclease SbcC Tax=CG_Pacearch_03
SMC protein
rifcsphigho2_02_scaffold_1957_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(16025..17176)
-----------------
DNA (1152bp)
protein (384aa)
metallophosphoesterase Tax=CG_Pacearch_03
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsphigho2_02_scaffold_1957_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17225..18991)
-----------------
DNA (1767bp)
protein (589aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
rifcsphigho2_02_scaffold_1957_18
unknown

Not on your lists

comp(19554..19706)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1957_19

Not on your lists


comp(20058..21740)
-----------------
DNA (1683bp)
protein (561aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1579377 species="Archaea.;" so
Arginine--tRNA ligase id=5800697 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_1957_20
GWC2_OD1_35_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22061..22354)
-----------------
DNA (294bp)
protein (98aa)
Antifreeze protein n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7KE08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKP88240.1}; TaxID=1618752 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_35_8.;"
hypothetical protein
rifcsphigho2_02_scaffold_1957_21
unknown

Not on your lists

comp(22447..22746)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1957_trna_1
unknown

Not on your lists

comp(22804..22875)
-----------------
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_1957_22
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

23045..23545
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DF465
MarR family transcriptional regulator Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein
rifcsphigho2_02_scaffold_1957_23
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

23594..24277
-----------------
DNA (684bp)
protein (228aa)
heavy metal transport/detoxification protein Tax=CG_Pacearch_06
heavy metal transport/detoxification protein id=5044089 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Heavy metal transport/detoxification protein
rifcsphigho2_02_scaffold_1957_24
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

24235..24747
-----------------
DNA (513bp)
protein (171aa)
heavy metal transport/detoxification protein Tax=CG_Pacearch_05
hypothetical protein id=5041918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_1957_25
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

24722..25129
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein
hypothetical protein Tax=AR1
Cupredoxin id=5044088 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_1957_26
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

25134..25625
-----------------
DNA (492bp)
protein (164aa)
Putative uncharacterized protein Tax=CG_Pacearch_05
"Winged helix" DNA-binding domain id=5800418 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1957_27
unknown

Not on your lists

25794..26075
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1957_28
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

26171..26437
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C2C4E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR15041.1}; TaxID=1618454 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_32.;"
rifcsphigho2_02_scaffold_1957_29
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

26547..27251
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR15048.1}; TaxID=1618454 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_32.;"
id=5103492 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Displaying items 1-30 of 38 in total

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