ggKbase home page

rifcsphigho2_02_scaffold_5828_17

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Pacearchaeota_38_12

partial RP 29 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 29 / 38 MC: 1
Location: 18696..20120

Top 3 Functional Annotations

Value Algorithm Source
PKD domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 599.0
  • Bit_score: 259
  • Evalue 1.30e-65
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 268.0
  • Bit_score: 111
  • Evalue 8.90e-22
transmembrane_regions id=5241494 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 268.0
  • Bit_score: 111
  • Evalue 3.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB1_FULL_RIF_OD1_06_38_37_curated → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1425
TTGCAGTTCTGCTCACAGAATGACGTCTACAAAAATTACAAATCATTCACCTGCCTCAACCCAGGAACACCTCAATCTTCCTGCACTTCATCAACTTCTCCAATCTTGCAGGAAGAATGTTCAGACTTTTGCGTCAACGGACAATGCATAGACATAACCTGCAGTACTGACGAAGATTGCGATGACTCCGACTCATTAACATTTGACCAGTGTCTCAACCCTGGCACTCCGCAAAGTTTCTGCCGAAACACAGAAATAAATTGTGCGCAAAATAATGACTGCGGCTTCACCGGATTTTTAGGAGAAGAATTCTGCGGATTAAATGACAACGTCTACAAAAACTATCAGGAATCTCTTTGTATAGCTCCTTCAACACTTGATTCATACTGCAGCCAGGAAGTAGCGCCAGAACTTATAGACGAATGTGACTACGCCTGCACAGATGGAATCTGCGTCAGATGCGACCAGAACCAAGATTGCAATGACAGTAATCCTCTAACAACAGACGTCTGCAAAAACCCAGACACAGTTGAAAGCTACTGCCAAAACACGCCCGTGCCAATACCCTGCTCCAAAAACTTAGACTGCGGCATCGACGGATTTGTCACAGAACCAGTCTGCTTCGGCTTGAACATCACAGGAGATTATAAAACATACACTTGCAATAACAAGGGAACCCCCCAATCATACTGCTCATCTTCAACACAAAAAATAGTTCAGGAAACCTGTGATGAGACCTGCGTAAACGCAGAATGCGTCGACATAACCTGCTACGAAAATGAAGATTGTGGAATCGACGGATATCTCGGCGAGCTGTTCTGTTCCGAAGACGACAAAGATGTCATGCAAATATTTCAATCATTCACCTGCCTCAGTCCCGGCACGCCGCAAAGCGAATGCAAGGCAGACTTAAATGAAGAAACAAAAGAAGAATGCGAAGACATTTGCATAGACGGACAATGTGAAGAAATAATCTGCTACAAAGATAATGATTGCGACGACAGCAAAGATAACACCAAAGATGTCTGCATAAACCCTGGAACATCTGAATCCTACTGCAATAACATTCCTCTTGACTGCACTCCTGGCGATGTAAGAGACTGCGGAGTGTCAGACATAGGAATCTGTCAATTAGGCTCGCAAATCTGCACTTCAGCAGGAGTCTGGGACAAATGCGTCGGAGCAGTAAATCCAGAAGAAGAAATCTGTGAAGATGAATTAGACAACGACTGCGACGGAATTGTAAACGAAGATTGTGAAGTATGCGAGAATCAATGTCTTGACGGGCAGAGAAGATGCGCGCTCTTGCACAAAGGATACCAGGTTTGCGGTGATTTTAACGACGATGGCTGTACTGAATGGAGTGAAACAAAAGTCTGCGGCTTGGGAAGAATTTGCATTGCAGGATTCTGCATTTGCCGTTGA
PROTEIN sequence
Length: 475
LQFCSQNDVYKNYKSFTCLNPGTPQSSCTSSTSPILQEECSDFCVNGQCIDITCSTDEDCDDSDSLTFDQCLNPGTPQSFCRNTEINCAQNNDCGFTGFLGEEFCGLNDNVYKNYQESLCIAPSTLDSYCSQEVAPELIDECDYACTDGICVRCDQNQDCNDSNPLTTDVCKNPDTVESYCQNTPVPIPCSKNLDCGIDGFVTEPVCFGLNITGDYKTYTCNNKGTPQSYCSSSTQKIVQETCDETCVNAECVDITCYENEDCGIDGYLGELFCSEDDKDVMQIFQSFTCLSPGTPQSECKADLNEETKEECEDICIDGQCEEIICYKDNDCDDSKDNTKDVCINPGTSESYCNNIPLDCTPGDVRDCGVSDIGICQLGSQICTSAGVWDKCVGAVNPEEEICEDELDNDCDGIVNEDCEVCENQCLDGQRRCALLHKGYQVCGDFNDDGCTEWSETKVCGLGRICIAGFCICR*