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rifcsphigho2_02_scaffold_5828

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5828_1
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(279..2483)
-----------------
DNA (2205bp)
protein (735aa)
group 1 glycosyl transferase Tax=CG_Pacearch_05
Group 1 glycosyl transferase id=3309943 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
glycosyltransferase (group I)
rifcsphigho2_02_scaffold_5828_2
unknown

Not on your lists

2863..3099
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_3
Leptospira licerasiae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3020..4027)
-----------------
DNA (1008bp)
protein (336aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EIE02925.1}; EC=2.4.-.- {ECO:0000313|EMBL:EIE02925.1};; TaxID=1049972 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Lept
Glycosyltransferase, group 2 family protein n=2 Tax=Leptospira licerasiae RepID=I0XVL7_9LEPT
glycosyl transferase
rifcsphigho2_02_scaffold_5828_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4296..5435)
-----------------
DNA (1140bp)
protein (380aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_5828_5
unknown

Not on your lists

comp(5856..6713)
-----------------
DNA (858bp)
protein (286aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_6
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6852..7514
-----------------
DNA (663bp)
protein (221aa)
Lipoprotein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2K1_MYXSD
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AGC42050.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipita
rifcsphigho2_02_scaffold_5828_7
unknown

Not on your lists

7587..8051
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_8
unknown

Not on your lists

8410..8886
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_9
unknown

Not on your lists

8888..9685
-----------------
DNA (798bp)
protein (266aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_10

Not on your lists

9981..12248
-----------------
DNA (2268bp)
protein (756aa)
hemagglutinin/hemolysin-like protein id=5046015 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Hemagglutinin/hemolysin-like protein {ECO:0000313|EMBL:KHO45825.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_5828_11

Not on your lists

comp(12467..12733)
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TE55_9EURY id=5103685 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO54848.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifcsphigho2_02_scaffold_5828_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12739..13041)
-----------------
DNA (303bp)
protein (101aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Putative uncharacterized protein id=3605381 bin=GWC2_Elusimicrobia_51_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
hypothetical protein
rifcsphigho2_02_scaffold_5828_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

13366..14787
-----------------
DNA (1422bp)
protein (474aa)
hypothetical protein Tax=CG_Pacearch_05
rifcsphigho2_02_scaffold_5828_14
unknown

Not on your lists

14852..16069
-----------------
DNA (1218bp)
protein (406aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16215..17135
-----------------
DNA (921bp)
protein (307aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_5828_16
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17312..18388
-----------------
DNA (1077bp)
protein (359aa)
PKD domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
rifcsphigho2_02_scaffold_5828_17
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

18696..20120
-----------------
DNA (1425bp)
protein (475aa)
PKD domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
hypothetical protein
transmembrane_regions id=5241494 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5828_18
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

20550..21170
-----------------
DNA (621bp)
protein (207aa)
id=5046014 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Pacearch_05
rifcsphigho2_02_scaffold_5828_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

21163..23751
-----------------
DNA (2589bp)
protein (863aa)
T1SS secreted agglutinin (RTX) Tax=RBG_13_Pacearchaeota_36_9_curated
hemagglutinin/hemolysin-like protein id=5046015 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
T1SS secreted agglutinin (RTX)
rifcsphigho2_02_scaffold_5828_20

Not on your lists

comp(24036..24788)
-----------------
DNA (753bp)
protein (251aa)
TatD DNase family protein {ECO:0000313|EMBL:KHO55087.1}; EC=3.1.21.- {ECO:0000313|EMBL:KHO55087.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
yabD; TatD-related deoxyribonuclease YabD; K03424 TatD DNase family protein [EC:3.1.21.-] id=5042290 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hydrolase, TatD family
rifcsphigho2_02_scaffold_5828_21
unknown

Not on your lists

comp(24938..25105)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_22
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(25121..25948)
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_5828_23
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(26017..28830)
-----------------
DNA (2814bp)
protein (938aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_Pacearch_06
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5828_24
unknown

Not on your lists

comp(28835..29089)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_25
unknown

Not on your lists

comp(29209..29397)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5828_26
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(29452..29715)
-----------------
DNA (264bp)
protein (88aa)
Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_5828_27
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29705..30520)
-----------------
DNA (816bp)
protein (272aa)
Tax=AR17
rifcsphigho2_02_scaffold_5828_28
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30474..30908)
-----------------
DNA (435bp)
protein (145aa)
Tax=AR17
rifcsphigho2_02_scaffold_5828_29
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31070..31588
-----------------
DNA (519bp)
protein (173aa)
msrAB; peptide methionine sulfoxide reductase msrA/msrB (EC:1.8.4.11 1.8.4.12)
Peptide methionine sulfoxide reductase msrA/msrB {ECO:0000313|EMBL:AHM58057.1}; EC=1.8.4.11 {ECO:0000313|EMBL:AHM58057.1};; EC=1.8.4.12 {ECO:0000313|EMBL:AHM58057.1};; TaxID=1286171 species="Bacteria;
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase id=14425745 bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
rifcsphigho2_02_scaffold_5828_30
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

31861..32289
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI00025583D0
hypothetical protein Tax=AR19
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy