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rifcsphigho2_02_scaffold_3566

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3566_1
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

2..253
-----------------
DNA (252bp)
protein (84aa)
UPF0173 metal-dependent hydrolase Mpsy_0457 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M8I2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKT92444.1}; TaxID=1618662 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
metal-dependent hydrolase
rifcsphigho2_02_scaffold_3566_2
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

266..652
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein Tax=GWA2_OD1_45_13
rifcsphigho2_02_scaffold_3566_3
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(665..2017)
-----------------
DNA (1353bp)
protein (451aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RG94_9CYAN
Uncharacterized protein Tax=CG_Micra_05
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
rifcsphigho2_02_scaffold_3566_4
unknown

Not on your lists

2112..2831
-----------------
DNA (720bp)
protein (240aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_5
unknown

Not on your lists

2828..3160
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_6
unknown

Not on your lists

3173..3796
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_7
unknown

Not on your lists

3783..4223
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_8
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

4268..4603
-----------------
DNA (336bp)
protein (112aa)
Tax=CG_Micra_05
rifcsphigho2_02_scaffold_3566_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4610..5281
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003816ED2
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
dolichol-phosphate mannosyltransferase
rifcsphigho2_02_scaffold_3566_10
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5308..6174)
-----------------
DNA (867bp)
protein (289aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH73_9EURY
Ribonuclease Z Tax=GWA2_OD1_45_13
rifcsphigho2_02_scaffold_3566_11
unknown

Not on your lists

comp(6212..6718)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_12
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

6972..8015
-----------------
DNA (1044bp)
protein (348aa)
cellulase (EC:3.2.1.4)
Cellulase {ECO:0000313|EMBL:KKT92450.1}; TaxID=1618662 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
Cytoplasmic M42 family peptidase id=1951440 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
rifcsphigho2_02_scaffold_3566_13
unknown

Not on your lists

8321..8596
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_14
unknown

Not on your lists

8675..8839
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_15
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8850..9065)
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJA4_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03861.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula form
rifcsphigho2_02_scaffold_3566_16
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(9165..10640)
-----------------
DNA (1476bp)
protein (492aa)
Replication factor C large subunit n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RI36_METVM
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Micra_05
replication factor C large subunit
rifcsphigho2_02_scaffold_3566_17
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

10678..11619
-----------------
DNA (942bp)
protein (314aa)
pyrD; dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_13_Spirochaetes_68_11_curated
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5041870 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrD; dihydroorotate dehydrogenase
rifcsphigho2_02_scaffold_3566_18
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

11624..12382
-----------------
DNA (759bp)
protein (253aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=CG_Micra_02
dihydroorotate dehydrogenase electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit id=5041871 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
dihydroorotate dehydrogenase electron transfer subunit
rifcsphigho2_02_scaffold_3566_19
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(12411..13742)
-----------------
DNA (1332bp)
protein (444aa)
Ss-DNA-specific exonuclease n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSH3_METAC
phosphoesterase RecJ domain protein; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Micra_05
recJ; ss-DNA-specific exonuclease
rifcsphigho2_02_scaffold_3566_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(13752..14126)
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein; K07158 Tax=CG_Aenigma_01
rifcsphigho2_02_scaffold_3566_21
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

14177..14704
-----------------
DNA (528bp)
protein (176aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000255|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000255|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRM56_METKA
SpoU-like RNA methylase
rifcsphigho2_02_scaffold_3566_22
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

14673..15425
-----------------
DNA (753bp)
protein (251aa)
Transcription factor E n=9 Tax=Sulfolobus islandicus RepID=TFE_SULIA
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha Tax=CG_Micra_05
Transcription factor TFIIE subunit alpha
rifcsphigho2_02_scaffold_3566_23
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(15828..16178)
-----------------
DNA (351bp)
protein (117aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA2_9EURY
hypothetical protein
PRC-barrel domain protein Tax=CG_Micra_05
rifcsphigho2_02_scaffold_3566_24
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(16183..17175)
-----------------
DNA (993bp)
protein (331aa)
IspA; geranylgeranyl pyrophosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=CG_Micra_05
Geranylgeranyl pyrophosphate synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXA1_METKA
IspA; geranylgeranyl pyrophosphate synthase
rifcsphigho2_02_scaffold_3566_trna_1
unknown

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comp(17337..17410)
-----------------
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_3566_25
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

17423..18079
-----------------
DNA (657bp)
protein (219aa)
Putative lipoprotein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UGP4_MYXSD
putative lipoprotein Tax=RBG_16_Acidobacteria_70_10_curated
putative lipoprotein
rifcsphigho2_02_scaffold_3566_26
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18069..18614
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPU0_METAC
Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:AKB11781.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarci
hypothetical protein
rifcsphigho2_02_scaffold_3566_27
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

18637..19032
-----------------
DNA (396bp)
protein (132aa)
metallopeptidase-like protein Tax=CG_Micra_05
metallopeptidase-like protein
hypothetical protein id=15191374 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rifcsphigho2_02_scaffold_3566_28
unknown

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comp(19018..19476)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3566_29
unknown

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comp(19478..20035)
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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