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rifcsphigho2_02_scaffold_6523_20

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Micrarchaeota_50_12

near complete RP 35 / 55 MC: 5 BSCG 13 / 51 ASCG 37 / 38
Location: comp(17294..18244)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01081}; Short=Psi5 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 317.0
  • Bit_score: 275
  • Evalue 9.10e-71
Probable tRNA pseudouridine synthase B n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=TRUB_ARCFU similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 317.0
  • Bit_score: 275
  • Evalue 6.50e-71
cbf5; H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 317.0
  • Bit_score: 275
  • Evalue 1.80e-71

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Taxonomy

Archaeoglobus fulgidus → Archaeoglobus → Archaeoglobales → Archaeoglobi → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 951
GTGCTAAAGCTGGCGGACTGCGAAACGGATGAGAAATACGGCACTTTCCCTTCAAAGCGCACAATGGAGCAAATGCTCGCATGCAGCATCGTGATAATAGACAAGCCGCAGGGCCCAACCTCGCACGAGGTAAGCGCAATTGTCAAGAGGTTGCTGCACGCGCAAAAAAGCGGCCATGCAGGGACGCTTGACCCGCAGGTTTCCGGAGTGCTTGTGGTGGGAATAAACCGCGCAACCCCTATGTTGCACTATCTTTCCGGCAGCAGGAAGGATTACGTGTGCCTGATGCGCTTTAAAAAGCTTCACGGCGAAGAGTATATAAAGAGCCTGCTCGCATCATTTGTGGGTGAAATAACGCAGACGCCCCCAAAGCTTTCTGCCGTGAGGAAGGTTGCGCGCAAGAGAAACATTTATTATATTGATGTGCACCAAATAAAAGGTACCGACGTGCTTTTTAGCGTAGGATGCGAGGCAGGGACATACATACGAACCCTTTGTTCCGACGTGGGAAAAAAATGTGGCGGAGCCAATATGCTTGAGCTTCGACGCGGCGAAGTCGGCACGATACAGGAGGAAATGGCGGTCAATTTGCAGAGGCTTTCAGACGCTGCATGGCTGCATTGGAACCGCCACGAAGAGGCTGCGTTGCGCAGCCTGCTAAAAAGCCCCGAGGAGCTCATAACGCTCCCAAAAATGTTCATAAAGGATTCTGCAATAGAGGCGGTGTGCGCAGGCGCACCCCTGAGCATAAAAGGAATATGCTCCCTAGACGAAAAGATAAAGAAGGGAACACAGTTTGCGGCGTTCAGCCAAAAAGGCGAATTGGTCGCAATATGCGATTCCCTTGAAGACGCCACTGCAATCGCAGGGATGCGCCAAGGGCTTGCAGGCAGGCCCGTGCGCGTGTGCATGCAAAGGGGAACATACCCAAAAGGATGGGCAACACGGTAA
PROTEIN sequence
Length: 317
VLKLADCETDEKYGTFPSKRTMEQMLACSIVIIDKPQGPTSHEVSAIVKRLLHAQKSGHAGTLDPQVSGVLVVGINRATPMLHYLSGSRKDYVCLMRFKKLHGEEYIKSLLASFVGEITQTPPKLSAVRKVARKRNIYYIDVHQIKGTDVLFSVGCEAGTYIRTLCSDVGKKCGGANMLELRRGEVGTIQEEMAVNLQRLSDAAWLHWNRHEEAALRSLLKSPEELITLPKMFIKDSAIEAVCAGAPLSIKGICSLDEKIKKGTQFAAFSQKGELVAICDSLEDATAIAGMRQGLAGRPVRVCMQRGTYPKGWATR*