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rifcsphigho2_02_scaffold_6523

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6523_1
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

2..247
-----------------
DNA (246bp)
protein (82aa)
Permease n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DMY8_9FIRM
hypothetical protein; K07089 Tax=CG_Micra_05
hypothetical protein
rifcsphigho2_02_scaffold_6523_2
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(792..1331)
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASA7_9ARCH
Putative uncharacterized protein Tax=AR13
fic; Fic family protein
rifcsphigho2_02_scaffold_6523_3
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(1365..2363)
-----------------
DNA (999bp)
protein (333aa)
diphosphomevalonate decarboxylase-like; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=CG_Micra_03
Uncharacterized protein n=1 Tax=Baudoinia compniacensis (strain UAMH 10762) RepID=M2NFC4_BAUCO
diphosphomevalonate decarboxylase
rifcsphigho2_02_scaffold_6523_4
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(2382..3134)
-----------------
DNA (753bp)
protein (251aa)
Isopentenyl phosphate kinase n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2SR98_METLZ
aspartate/glutamate/uridylate kinase; K06981 Tax=CG_Micra_05
helix-turn-helix domain-containing protein
rifcsphigho2_02_scaffold_6523_5
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

3480..3755
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEZ9_METFS
hypothetical protein Tax=CG_Micra_04
hypothetical protein
rifcsphigho2_02_scaffold_6523_6
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

3985..5811
-----------------
DNA (1827bp)
protein (609aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A4N7_THEGJ
arginyl-tRNA synthetase Tax=CG_Micra_05
rifcsphigho2_02_scaffold_6523_7
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(5818..7902)
-----------------
DNA (2085bp)
protein (695aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] Tax=CG_Micra_05
Peptidase S16, Lon-like protease n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGV1_9EURY
ATP-dependent protease Lon
rifcsphigho2_02_scaffold_6523_8
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8015..9232
-----------------
DNA (1218bp)
protein (406aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=679901 species="Archaea; Euryarchaeota; Metha
DNA polymerase IV n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL41_METZD
rifcsphigho2_02_scaffold_6523_9
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

9289..10437
-----------------
DNA (1149bp)
protein (383aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000381BFF6
Tax=CG_Micra_05
rifcsphigho2_02_scaffold_6523_10
unknown

Not on your lists

10550..11191
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6523_11
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(11392..12222)
-----------------
DNA (831bp)
protein (277aa)
30S ribosomal protein S2 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCL0_METIK
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Micra_05
30S ribosomal protein S2
rifcsphigho2_02_scaffold_6523_12
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(12569..12766)
-----------------
DNA (198bp)
protein (66aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Th
DNA-directed RNA polymerase subunit N n=1 Tax=Thermofilum sp. 1910b RepID=S5Z6A0_9CREN
hypothetical protein
rifcsphigho2_02_scaffold_6523_13
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists


comp(12782..13222)
-----------------
DNA (441bp)
protein (147aa)
30S ribosomal protein S9 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BAL0_9EURY
SSU ribosomal protein S9P Tax=CG_Micra_01
30S ribosomal protein S9
rifcsphigho2_02_scaffold_6523_14
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(13253..13672)
-----------------
DNA (420bp)
protein (140aa)
50S ribosomal protein L13 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL13_METKA
rpl13P; 50S ribosomal protein L13P; K02871 large subunit ribosomal protein L13 Tax=CG_Micra_05
RplM; 50S ribosomal protein L13
rifcsphigho2_02_scaffold_6523_15
Thermosphaera aggregans, Thermosphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(13707..13979)
-----------------
DNA (273bp)
protein (91aa)
50S ribosomal protein L18e n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3F3_THEAM
50S ribosomal protein L18
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=633148 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermosphaera.;" source="Thermosphaera
rifcsphigho2_02_scaffold_6523_trna_1
unknown

Not on your lists

comp(14081..14165)
-----------------
DNA (85bp)
transferRNA
rifcsphigho2_02_scaffold_6523_16
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(14195..14803)
-----------------
DNA (609bp)
protein (203aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Micra_05
RNA polymerase insert n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIN8_9EURY
RNA polymerase insert
rifcsphigho2_02_scaffold_6523_17
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(14816..15553)
-----------------
DNA (738bp)
protein (246aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=A0SNY7_9EURY
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Micra_05
30S ribosomal protein S11
rifcsphigho2_02_scaffold_6523_18
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(15564..16130)
-----------------
DNA (567bp)
protein (189aa)
30S ribosomal protein S4 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS14_METIM
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Micra_05
30S ribosomal protein S4
rifcsphigho2_02_scaffold_6523_19
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(16148..16912)
-----------------
DNA (765bp)
protein (255aa)
30S ribosomal protein S13 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKR3_NITGG
rps13p; 30S ribosomal protein S13p Tax=CG_Micra_05
SSU ribosomal protein S13P
rifcsphigho2_02_scaffold_6523_20
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(17294..18244)
-----------------
DNA (951bp)
protein (317aa)
Probable tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01081}; Short=Psi5
Probable tRNA pseudouridine synthase B n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=TRUB_ARCFU
cbf5; H/ACA RNA-protein complex component Cbf5p
rifcsphigho2_02_scaffold_6523_21
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(18255..18431)
-----------------
DNA (177bp)
protein (59aa)
50S ribosomal protein L14e {ECO:0000255|HAMAP-Rule:MF_00721}; TaxID=426368 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus mari
rifcsphigho2_02_scaffold_6523_22
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(18437..18994)
-----------------
DNA (558bp)
protein (186aa)
Cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=CG_Micra_05
Cytidylate kinase n=1 Tax=mine drainage metagenome RepID=T0ZNN3_9ZZZZ
cytidylate kinase
rifcsphigho2_02_scaffold_6523_23
unknown

Not on your lists


comp(19019..19342)
-----------------
DNA (324bp)
protein (108aa)
50S ribosomal protein L34
rifcsphigho2_02_scaffold_6523_24
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(19417..20337)
-----------------
DNA (921bp)
protein (307aa)
Tax=CG_Micra_05
rifcsphigho2_02_scaffold_6523_25
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(20412..20906)
-----------------
DNA (495bp)
protein (165aa)
AdkA; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=CG_Micra_05
AdkA; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=KADA_METKA
rifcsphigho2_02_scaffold_6523_26
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(20944..22431)
-----------------
DNA (1488bp)
protein (496aa)
SecY protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI14_9EURY rbh
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Micra_05
preprotein translocase subunit SecY
rifcsphigho2_02_scaffold_6523_27

Not on your lists


comp(22525..22980)
-----------------
DNA (456bp)
protein (152aa)
Ribosomal protein L15 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIP5_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15
rifcsphigho2_02_scaffold_6523_28
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


comp(23005..23448)
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000370F4C6
50S ribosomal protein L30P
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobu
rifcsphigho2_02_scaffold_6523_29
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists


comp(23488..24180)
-----------------
DNA (693bp)
protein (231aa)
Ribosomal protein S5 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIU7_9EURY
SSU ribosomal protein S5P Tax=CG_Micra_01
rps5p; 30S ribosomal protein S5
Displaying items 1-30 of 51 in total

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