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rifcsphigho2_02_scaffold_6018

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6018_1

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3..920
-----------------
DNA (918bp)
protein (306aa)
aldH; aldehyde dehydrogenase NAD+ (EC:1.2.1.3)
aldH; aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] id=5241608 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Aldehyde dehydrogenase NAD {ECO:0000313|EMBL:AJF60599.1}; EC=1.2.1.3 {ECO:0000313|EMBL:AJF60599.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_6018_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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991..1188
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATT2_9ARCH
id=5050671 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_6018_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1181..1567
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUB7_9ARCH
hypothetical protein
Uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_6018_4
unknown

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1572..1691
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6018_5
unknown

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comp(1713..2033)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6018_6
unknown

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2193..3281
-----------------
DNA (1089bp)
protein (363aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6018_7
AR17, Woesearchaeaota, DPANN, Archaea

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3513..3884
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
transposase; K07491 putative transposase Tax=AR17
transposase
rifcsphigho2_02_scaffold_6018_8
AR10, Diapherotrites, DPANN, Archaea

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3961..5268
-----------------
DNA (1308bp)
protein (436aa)
argD; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
argD; acetylornithine aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] id=5241609 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
argD; acetylornithine aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=AR10
rifcsphigho2_02_scaffold_6018_9
unknown

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5374..5712
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6018_10
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5866..6855)
-----------------
DNA (990bp)
protein (330aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376B462
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AEB67314.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta conci
rifcsphigho2_02_scaffold_6018_11

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6916..8907
-----------------
DNA (1992bp)
protein (664aa)
Putative ATPase id=5800155 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61486.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_6018_12

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comp(8956..9708)
-----------------
DNA (753bp)
protein (251aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362846D
putative tRNA pseudouridine synthase B
rifcsphigho2_02_scaffold_6018_13

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comp(9721..9966)
-----------------
DNA (246bp)
protein (82aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative tRNA pseudouridine synthase B
rifcsphigho2_02_scaffold_6018_14

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10019..10639
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein id=5049618 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53656.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
putative membrane-associated protein
rifcsphigho2_02_scaffold_6018_15

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comp(10636..10926)
-----------------
DNA (291bp)
protein (97aa)
Putative uncharacterized protein id=5800618 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61949.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
metal-sulfur cluster biosynthetic enzyme
rifcsphigho2_02_scaffold_6018_16
unknown

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comp(10957..11268)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6018_17
unknown

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comp(11271..11807)
-----------------
DNA (537bp)
protein (179aa)
Ribosomal protein L31e n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5Q9_9ARCH id=5103296 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal protein L31e n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5Q9_9ARCH Tax=AR20
Ribosomal protein L31e
rifcsphigho2_02_scaffold_6018_18
AR20, Woesearchaeaota, DPANN, Archaea

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comp(11814..12026)
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein
id=5103297 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_6018_19

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comp(11989..12330)
-----------------
DNA (342bp)
protein (114aa)
DNA-binding protein; K06875 programmed cell death protein 5 id=5049180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO51577.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-binding protein
rifcsphigho2_02_scaffold_6018_20

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comp(12323..12754)
-----------------
DNA (432bp)
protein (144aa)
30S ribosomal protein S19e n=4 Tax=Methanocaldococcus RepID=RS19E_METJA id=5103299 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S19e
30S ribosomal protein S19e {ECO:0000313|EMBL:AJF62580.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_6018_21
unknown

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comp(12851..13015)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6018_22
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13031..13225)
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH12070.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
rifcsphigho2_02_scaffold_6018_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(13444..13884)
-----------------
DNA (441bp)
protein (147aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Putative uncharacterized protein Tax=CG_Aenigma_01
rifcsphigho2_02_scaffold_6018_24
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(13881..14465)
-----------------
DNA (585bp)
protein (195aa)
Transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PJD3_9ZZZZ
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_02_scaffold_6018_25
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

14647..14778
-----------------
DNA (132bp)
protein (44aa)
Tax=AR19
rifcsphigho2_02_scaffold_6018_26
AR9, Woesearchaeaota, DPANN, Archaea

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comp(14784..15977)
-----------------
DNA (1194bp)
protein (398aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=AR9
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=SYC_DICTD
rifcsphigho2_02_scaffold_6018_27
GWC2_OD1_44_8_partial, Giovannonibacteria, Parcubacteria, Bacteria

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comp(16091..16207)
-----------------
DNA (117bp)
protein (39aa)
Cysteine-tRNA ligase {ECO:0000313|EMBL:KKT76937.1}; Flags: Fragment;; TaxID=1618657 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_44_8.;"
rifcsphigho2_02_scaffold_6018_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(16212..16796)
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364EA5D
hypothetical protein; K07096 Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_6018_29

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comp(16996..17550)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein
id=5044957 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54557.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_6018_30
unknown

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comp(17580..18251)
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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