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rifcsphigho2_02_scaffold_4010

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4010_1
unknown

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2..118
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_2
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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238..1260
-----------------
DNA (1023bp)
protein (341aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-phosphate cyclase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBN3_METMS
rifcsphigho2_02_scaffold_4010_3
R_OP11_Curtissbacteria_40_11, Curtissbacteria, Microgenomates, Bacteria

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comp(1198..1869)
-----------------
DNA (672bp)
protein (224aa)
Integral membrane protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NNL6_9FIRM id=5103510 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OP11_Curtissbacteria_40_11_curated
Integral membrane protein
rifcsphigho2_02_scaffold_4010_4
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

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comp(1873..2301)
-----------------
DNA (429bp)
protein (143aa)
dUTP diphosphatase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
dUTPase n=1 Tax=unclassified Aminicenantes RepID=UPI000376ECAA
rifcsphigho2_02_scaffold_4010_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2363..2719)
-----------------
DNA (357bp)
protein (119aa)
id=5041840 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_4010_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2879..3859)
-----------------
DNA (981bp)
protein (327aa)
Sodium/calcium exchanger protein n=2 Tax=Methanosarcina mazei RepID=M1PU42_METMZ
Sodium/calcium exchanger protein {ECO:0000313|EMBL:AKB40049.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methano
K+-dependent Na+/Ca+ exchanger related-protein
rifcsphigho2_02_scaffold_4010_trna_1
unknown

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3925..4062
-----------------
DNA (138bp)
transferRNA
rifcsphigho2_02_scaffold_4010_7
unknown

Not on your lists

3931..4101
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_8
unknown

Not on your lists

4268..4672
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4956..5546
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000365532B
Nucleotidyl transferase domain Tax=CG_Woesearch_01
Nucleotidyl transferase domain
rifcsphigho2_02_scaffold_4010_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

5644..6015
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035C462D
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_02_scaffold_4010_11
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

6040..6927
-----------------
DNA (888bp)
protein (296aa)
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_RIF_OD1_07_37_56_curated
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=5041614 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transporter, ATP-binding protein
rifcsphigho2_02_scaffold_4010_12
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6927..7673
-----------------
DNA (747bp)
protein (249aa)
ABC transporter permease; K09686 antibiotic transport system permease protein id=5041613 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=AR4
ABC transporter permease
rifcsphigho2_02_scaffold_4010_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(7706..8524)
-----------------
DNA (819bp)
protein (273aa)
ial:IALB_2363 Putative reductase id=720580 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
Putative reductase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
reductase
rifcsphigho2_02_scaffold_4010_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8849..9550
-----------------
DNA (702bp)
protein (234aa)
tRNA (adenine-n(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=AR18
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BCC2D
tRNA (Adenine-57, 58-N(1)-) methyltransferase
rifcsphigho2_02_scaffold_4010_15
unknown

Not on your lists

9652..10119
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_16

Not on your lists

comp(10147..11163)
-----------------
DNA (1017bp)
protein (339aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT93381.1}; TaxID=1618832 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_45_14.;"
hypothetical protein id=13493 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
rifcsphigho2_02_scaffold_4010_17
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(11222..11602)
-----------------
DNA (381bp)
protein (127aa)
Transposase-like protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIU2_9EURY
Transposase-like protein
Transposase-like protein {ECO:0000313|EMBL:AGK60045.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfatical
rifcsphigho2_02_scaffold_4010_18
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11655..12803
-----------------
DNA (1149bp)
protein (383aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380B0B1
transposase
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsphigho2_02_scaffold_4010_19
unknown

Not on your lists

comp(12796..13275)
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_20

Not on your lists

13398..15230
-----------------
DNA (1833bp)
protein (611aa)
Uncharacterized protein n=4 Tax=Pyrococcus RepID=Q8U211_PYRFU id=5103802 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63080.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_4010_21
Arabis alpina, Arabis, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

15295..15915
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein (Fragment) n=1 Tax=Gorilla gorilla gorilla RepID=G3SIS9_GORGO
Uncharacterized protein {ECO:0000313|EMBL:KFK34969.1}; TaxID=50452 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
co-chaperone-curved DNA binding protein A
rifcsphigho2_02_scaffold_4010_22
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

15934..16725
-----------------
DNA (792bp)
protein (264aa)
Uncharacterized protein n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UWQ2_META3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ06375.1}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldoco
rifcsphigho2_02_scaffold_4010_23
unknown

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comp(16710..16838)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_24
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(16835..17437)
-----------------
DNA (603bp)
protein (201aa)
Putative nucleotidase yqfW n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MLR3_9BACT id=133792 bin=ACD81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKR12523.1}; TaxID=1619013 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC2_39_22.;"
hypothetical protein, conserved
rifcsphigho2_02_scaffold_4010_25
unknown

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comp(18008..18583)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4010_26
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

18885..19730
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000375F3AE rbh
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
rifcsphigho2_02_scaffold_4010_27

Not on your lists

19732..20922
-----------------
DNA (1191bp)
protein (397aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379ED05
Major facilitator transporter {ECO:0000313|EMBL:KHO49079.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
MFS transporter
Displaying 28 items

View Taxonomy