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rifcsphigho2_02_scaffold_4721

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4721_1
unknown

Not on your lists

comp(1..417)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_2
unknown

Not on your lists


859..1200
-----------------
DNA (342bp)
protein (114aa)
50S ribosomal protein L7Ae n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE id=5103741 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L7Ae n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE Tax=AR20
50S ribosomal protein L7Ae
rifcsphigho2_02_scaffold_4721_3
unknown

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1220..1357
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_4

Not on your lists


1326..1487
-----------------
DNA (162bp)
protein (54aa)
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e id=5045757 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
30S ribosomal protein S28e
rifcsphigho2_02_scaffold_4721_5
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

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comp(1733..2242)
-----------------
DNA (510bp)
protein (170aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
rifcsphigho2_02_scaffold_4721_6
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

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comp(2245..2742)
-----------------
DNA (498bp)
protein (166aa)
adenylate cyclase Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
alias=gwe2_scaffold_198_22 id=15190205 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rifcsphigho2_02_scaffold_4721_7

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comp(2744..3787)
-----------------
DNA (1044bp)
protein (348aa)
PepQ-2 cobalt-dependent proline dipeptidase (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] id=5041800 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KHO53032.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
metallopeptidase
rifcsphigho2_02_scaffold_4721_8
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3784..4734)
-----------------
DNA (951bp)
protein (317aa)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A6G8_MELRP
leucyl aminopeptidase (aminopeptidase T)
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:AFN75461.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source
rifcsphigho2_02_scaffold_4721_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4900..5676)
-----------------
DNA (777bp)
protein (259aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L505_9BACT
pyrroline-5-carboxylate reductase Tax=RBG_16_Euryarchaeota_41_19_curated
rifcsphigho2_02_scaffold_4721_10
unknown

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comp(5651..5740)
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_11
unknown

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6006..6428
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_12
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6406..7518)
-----------------
DNA (1113bp)
protein (371aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5048255 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=AR18
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
rifcsphigho2_02_scaffold_4721_13
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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7572..7931
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein id=12873 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
hypothetical protein
rifcsphigho2_02_scaffold_4721_14

Not on your lists


7966..9741
-----------------
DNA (1776bp)
protein (592aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHO50641.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KHO50641.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003663F84
rifcsphigho2_02_scaffold_4721_15
GWC2_OD1_44_9, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9751..10104)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT82404.1}; TaxID=1618658 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_44_9.;"
hypothetical protein id=5041689 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_4721_16
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(10101..10394)
-----------------
DNA (294bp)
protein (98aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27B6 RepID=Q64BH2_9ARCH
DNA polymerase beta domain-containing protein region; K07075 Tax=CG_Aenigma_01
DNA polymerase beta domain-containing protein region
rifcsphigho2_02_scaffold_4721_17
unknown

Not on your lists

comp(10604..10840)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_18

Not on your lists

11047..11331
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003702958
rifcsphigho2_02_scaffold_4721_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

11332..12699
-----------------
DNA (1368bp)
protein (456aa)
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=AR15
rifcsphigho2_02_scaffold_4721_20

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12708..14093
-----------------
DNA (1386bp)
protein (462aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037251BD
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B
rifcsphigho2_02_scaffold_4721_21

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comp(14096..15040)
-----------------
DNA (945bp)
protein (315aa)
MscS Mechanosensitive ion channel n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L150_9EURY
MscS mechanosensitive ion channel {ECO:0000313|EMBL:KHO55297.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
mechanosensitive ion channel protein MscS
rifcsphigho2_02_scaffold_4721_trna_1
unknown

Not on your lists

15241..15331
-----------------
DNA (91bp)
transferRNA
rifcsphigho2_02_scaffold_4721_22
GWC2_OP11_43_12, Collierbacteria, Microgenomates, Bacteria

Not on your lists

15280..16179
-----------------
DNA (900bp)
protein (300aa)
Methyltransferase type 11 domain protein n=1 Tax=mine drainage metagenome RepID=T0YNX2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKS91756.1}; TaxID=1618390 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWC2_43_12.;"
hypothetical protein
rifcsphigho2_02_scaffold_4721_trna_2
unknown

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16180..16253
-----------------
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_4721_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


16515..17981
-----------------
DNA (1467bp)
protein (489aa)
prolyl-tRNA synthetase (EC:6.1.1.16); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_01
prolyl-tRNA synthetase (EC:6.1.1.16)
Proline--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=SYP_THEPD
rifcsphigho2_02_scaffold_4721_24
unknown

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comp(18166..18582)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_25
unknown

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comp(18618..20321)
-----------------
DNA (1704bp)
protein (568aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_26
unknown

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comp(20383..20493)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4721_27

Not on your lists

20584..21126
-----------------
DNA (543bp)
protein (181aa)
Predicted transcription regulator, containing CBS domains n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JGL2_PYRKO id=5102981 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative transcription regulator, containing CBS protein
Putative transcription regulator, containing CBS protein {ECO:0000313|EMBL:AJF62262.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_4721_28
unknown

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comp(21131..23266)
-----------------
DNA (2136bp)
protein (712aa)
Transglutaminase domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8ICE3_SULAT id=5102934 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transglutaminase domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8ICE3_SULAT Tax=AR20
Transglutaminase protein
Displaying items 1-30 of 45 in total

View Taxonomy