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rifcsphigho2_02_scaffold_10044

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10044_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1127)
-----------------
DNA (1125bp)
protein (375aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VP94_9BRAD
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase Tax=GWA2_Rhodocyclales_65_20_curated
rifcsphigho2_02_scaffold_10044_2

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1227..1784
-----------------
DNA (558bp)
protein (186aa)
LemA protein {ECO:0000313|EMBL:KHO50195.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
LemA family protein; K03744 LemA protein id=5048305 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LemA family protein
rifcsphigho2_02_scaffold_10044_3

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1812..2702
-----------------
DNA (891bp)
protein (297aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Protease HtpX-like protein
hypothetical protein id=8265838 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
rifcsphigho2_02_scaffold_10044_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(2810..3454)
-----------------
DNA (645bp)
protein (215aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
beta-lactamase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B7992F
beta-lactamase domain-containing protein
rifcsphigho2_02_scaffold_10044_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3451..4611)
-----------------
DNA (1161bp)
protein (387aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=CG_Woesearch_02
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5240748 bin=GW2011_AR10_complete species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_10044_6

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comp(4667..5758)
-----------------
DNA (1092bp)
protein (364aa)
Replication factor C large subunit n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RFCL_NANEQ id=5103216 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Replication factor C large subunit
Replication factor C large subunit {ECO:0000313|EMBL:AJF62497.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_10044_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6000..6965)
-----------------
DNA (966bp)
protein (322aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Woesearch_02
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C small subunit
rifcsphigho2_02_scaffold_10044_8
CG_Woesearch_02, Woesearchaeota, Archaea

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7038..7964
-----------------
DNA (927bp)
protein (309aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] Tax=CG_Woesearch_02
Pyridoxal-5'-phosphate-dependent enzyme subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA8_9GAMM
Cysteine synthase
rifcsphigho2_02_scaffold_10044_9

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comp(7992..8360)
-----------------
DNA (369bp)
protein (123aa)
Putative deoxyribonuclease/rho motif-related TRAM n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF3_NITGG id=5103220 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62501.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_10044_10
unknown

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comp(8495..8686)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10044_11
unknown

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comp(8692..8964)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10044_12
AR18, Woesearchaeaota, DPANN, Archaea

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9015..11822
-----------------
DNA (2808bp)
protein (936aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5048859 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=AR18
isoleucyl-tRNA synthetase
rifcsphigho2_02_scaffold_10044_13
unknown

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comp(11846..12031)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10044_14
unknown

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comp(12045..12461)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10044_15
unknown

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comp(12433..12543)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10044_16
unknown

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12622..13164
-----------------
DNA (543bp)
protein (181aa)
TATA-box-binding protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY9_9EURY id=5103223 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TATA-box-binding protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY9_9EURY Tax=AR20
TATA-box-binding protein
rifcsphigho2_02_scaffold_10044_17
AR18, Woesearchaeaota, DPANN, Archaea

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13364..13534
-----------------
DNA (171bp)
protein (57aa)
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=5048855 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=AR18
DNA replication initiator Cdc21/Cdc54
Displaying 17 items

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