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rifcsphigho2_02_scaffold_3505

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3505_1
RLO_OD1_Moranbacteria_48_12, Moranbacteria, Parcubacteria, Bacteria

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354..1700
-----------------
DNA (1347bp)
protein (449aa)
sodium:solute symporter family protein id=5044936 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Na+/solute symporter; K03307 solute:Na+ symporter, SSS family Tax=RIFCSPLOWO2_12_FULL_OD1_Moranbacteria_48_12_curated
sodium:solute symporter
rifcsphigho2_02_scaffold_3505_2

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comp(1941..2237)
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035D7AA7
Putative uncharacterized protein {ECO:0000313|EMBL:CBH40072.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
rifcsphigho2_02_scaffold_3505_3

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comp(2238..2393)
-----------------
DNA (156bp)
protein (52aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A8DD
Putative uncharacterized protein {ECO:0000313|EMBL:CBH40071.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_02_scaffold_3505_4
unknown

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comp(2769..3314)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3505_5
Bartonella sp. 1-1C, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3345..4250)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Bartonella sp. 1-1C RepID=E6YX97_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CBI81485.1}; TaxID=515256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella sp. 1-1C.;"
hypothetical protein
rifcsphigho2_02_scaffold_3505_6
unknown

Not on your lists

comp(4286..4762)
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3505_7
unknown

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comp(4912..5922)
-----------------
DNA (1011bp)
protein (337aa)
Type II secretion system protein F GspF2 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA00_9EURY id=5102969 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Type II secretion system protein F GspF2 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA00_9EURY Tax=AR20
Type II secretion system protein F GspF2
rifcsphigho2_02_scaffold_3505_8
unknown

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comp(5922..6722)
-----------------
DNA (801bp)
protein (267aa)
Type II secretion system protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG92_9EURY id=5102968 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Type II secretion system protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG92_9EURY Tax=AR20
Type II secretion system protein
rifcsphigho2_02_scaffold_3505_9

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comp(6724..8181)
-----------------
DNA (1458bp)
protein (486aa)
Secretory protein kinase n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AD08_9EURY id=5102967 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Secretory protein kinase
Secretory protein kinase {ECO:0000313|EMBL:AJF62248.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_3505_10

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comp(8224..8778)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein
id=5102964 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62245.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_3505_11
unknown

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9138..10298
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E5234
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM Tax=AR20
Translation initiation factor 2 subunit gamma
rifcsphigho2_02_scaffold_3505_12
unknown

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10314..10508
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3505_13

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10782..11996
-----------------
DNA (1215bp)
protein (405aa)
Metallophosphoesterase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXV9_METFV id=5103604 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AJF62885.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_3505_14

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11983..14040
-----------------
DNA (2058bp)
protein (686aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC protein
SMC protein {ECO:0000313|EMBL:AJF62886.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_3505_15

Not on your lists

14073..14555
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein
id=5103790 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63068.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_3505_16
AR20, Woesearchaeaota, DPANN, Archaea

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14549..14986
-----------------
DNA (438bp)
protein (146aa)
hypothetical protein
id=5103789 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_3505_trna_1
unknown

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15090..15215
-----------------
DNA (126bp)
transferRNA
rifcsphigho2_02_scaffold_3505_17
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15358..15876
-----------------
DNA (519bp)
protein (173aa)
Alpha-L-glutamate ligase family protein n=1 Tax=Bacteroides sp. D22 RepID=D7J4F2_9BACE
30S ribosomal protein S6 modification protein-like protein
ATP-grasp domain protein {ECO:0000313|EMBL:EEO50668.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
rifcsphigho2_02_scaffold_3505_18
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15848..16708
-----------------
DNA (861bp)
protein (287aa)
glutathione synthase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D72C
Ribosomal protein S6 glutaminyl transferase related protein {ECO:0000313|EMBL:GAO28666.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" so
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase)
rifcsphigho2_02_scaffold_3505_19

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comp(16713..17255)
-----------------
DNA (543bp)
protein (181aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BEQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO51812.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
rifcsphigho2_02_scaffold_3505_20
unknown

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comp(17303..17719)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3505_21
unknown

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comp(17755..18357)
-----------------
DNA (603bp)
protein (201aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ Tax=AR20
30S ribosomal protein S2
rifcsphigho2_02_scaffold_3505_22
unknown

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comp(18572..19252)
-----------------
DNA (681bp)
protein (227aa)
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR id=5102941 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR Tax=AR20
Conserved TM helix repeat-containing protein
rifcsphigho2_02_scaffold_3505_23
unknown

Not on your lists

19404..20408
-----------------
DNA (1005bp)
protein (335aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3505_24
AR20, Woesearchaeaota, DPANN, Archaea

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comp(20451..22031)
-----------------
DNA (1581bp)
protein (527aa)
hypothetical protein
id=5102982 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_3505_25
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

22142..22537
-----------------
DNA (396bp)
protein (132aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RBG_13_RIF_OD1_07_42_11_curated
Threonine--tRNA ligase n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SN00_9FIRM
Threonine-tRNA ligase
rifcsphigho2_02_scaffold_3505_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

22546..23796
-----------------
DNA (1251bp)
protein (417aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Threonine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU4_NIAKG
threonyl-tRNA synthetase
rifcsphigho2_02_scaffold_3505_27
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

23777..24259
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP27104.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
seg id=5043708 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3505_28
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(24504..25232)
-----------------
DNA (729bp)
protein (243aa)
TrmB family transcriptional regulator Tax=CG_Pacearch_06
transcriptional regulator TrmB id=5046026 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator, TrmB
rifcsphigho2_02_scaffold_3505_29
unknown

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25327..25773
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

View Taxonomy