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rifcsphigho2_02_scaffold_16561

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16561_1

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166..480
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62973.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_16561_2
AR18, Woesearchaeaota, DPANN, Archaea

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comp(475..1392)
-----------------
DNA (918bp)
protein (306aa)
protein phosphatase-1 id=5047397 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
protein phosphatase-1 Tax=AR18
metallophosphoesterase
rifcsphigho2_02_scaffold_16561_3
CG_Woesearch_02, Woesearchaeota, Archaea

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1445..1735
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L21e n=2 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL21_NANEQ id=5103694 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=CG_Woesearch_02
50S ribosomal protein L21e
rifcsphigho2_02_scaffold_16561_4

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1753..2094
-----------------
DNA (342bp)
protein (114aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62971.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_16561_5

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2130..2690
-----------------
DNA (561bp)
protein (187aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_16561_6
unknown

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comp(2757..2951)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16561_7
unknown

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3076..3594
-----------------
DNA (519bp)
protein (173aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ Tax=AR20
30S ribosomal protein S13
rifcsphigho2_02_scaffold_16561_8
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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3597..4292
-----------------
DNA (696bp)
protein (232aa)
30S ribosomal protein S4 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD43_METIK
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanoto
rifcsphigho2_02_scaffold_16561_9
AR15, Woesearchaeaota, DPANN, Archaea

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4289..4705
-----------------
DNA (417bp)
protein (139aa)
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S11 Tax=AR15
30S ribosomal protein S11
rifcsphigho2_02_scaffold_16561_10
unknown

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comp(4781..5320)
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSA0_VULDI id=5103607 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSA0_VULDI Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_16561_trna_1
unknown

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5362..5434
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_16561_11

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5924..7189
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037720AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO53410.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsphigho2_02_scaffold_16561_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(7218..7529)
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369AAB9
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_16561_13
CG_Pacearch_04, Pacearchaeota, Archaea

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7652..7930
-----------------
DNA (279bp)
protein (93aa)
hypothetical protein
hypothetical protein Tax=CG_Pacearch_04
alias=gwa2_scaffold_521_35 id=18248225 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_16561_14
CG_Woesearch_03, Woesearchaeota, Archaea

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8072..8833
-----------------
DNA (762bp)
protein (254aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=CG_Woesearch_03
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B6AE2
Prolipoprotein diacylglyceryl transferase
rifcsphigho2_02_scaffold_16561_15
unknown

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8830..9129
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16561_16

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comp(9130..9315)
-----------------
DNA (186bp)
protein (62aa)
RNA methylase, NOL1/NOP2/sun family n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2T5_FERPA id=5103608 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S12H4_S27456 {ECO:0000313|EMBL:GAJ18464.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
RNA methylase, NOL1/NOP2/sun family
Displaying 17 items

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