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rifcsphigho2_02_scaffold_23363

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_23363_1
unknown

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comp(1..459)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23363_2
AR1, Pacearchaeaota, DPANN, Archaea

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530..1264
-----------------
DNA (735bp)
protein (245aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
hypothetical protein Tax=AR1
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_23363_3
unknown

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1345..1584
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23363_4
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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1554..1961
-----------------
DNA (408bp)
protein (136aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LK77_THEBM
hypothetical protein
rifcsphigho2_02_scaffold_23363_5
CG_CPR02_01, CG_CPR02, Bacteria

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comp(1855..2301)
-----------------
DNA (447bp)
protein (149aa)
GLUG domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XND0_METZD
GLUG domain-containing protein Tax=CG_CPR02_01
GLUG domain-containing protein
rifcsphigho2_02_scaffold_23363_6
unknown

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comp(2294..2482)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23363_7

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2943..3887
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003773F90
Marine sediment metagenome DNA, contig: S06H3_S00013 {ECO:0000313|EMBL:GAI32157.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Filamentation induced by cAMP protein Fic
rifcsphigho2_02_scaffold_23363_8

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comp(3911..4426)
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY id=5103468 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S03H2_C00951 {ECO:0000313|EMBL:GAH27123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_02_scaffold_23363_9
unknown

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comp(4503..4820)
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23363_10

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comp(4882..5481)
-----------------
DNA (600bp)
protein (200aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000313|EMBL:AJF63045.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_23363_11

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comp(5483..5920)
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5044114 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S12
rifcsphigho2_02_scaffold_23363_12

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comp(5923..6321)
-----------------
DNA (399bp)
protein (133aa)
Putative KH domain protein n=3 Tax=environmental samples RepID=B3T301_9ARCH id=5103769 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63047.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_23363_13

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comp(6326..6574)
-----------------
DNA (249bp)
protein (83aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000313|EMBL:AJF63053.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_23363_14
unknown

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6864..7526
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

Displaying 14 items

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