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rifcsphigho2_02_scaffold_2101

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2101_1
unknown

Not on your lists

comp(257..721)
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_2
unknown

Not on your lists

comp(676..819)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_3
unknown

Not on your lists

comp(839..1195)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_4

Not on your lists

comp(1254..2030)
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62425.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2101_5
unknown

Not on your lists

comp(2290..3069)
-----------------
DNA (780bp)
protein (260aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 Tax=AR20
Translation initiation factor 2 subunit alpha
rifcsphigho2_02_scaffold_2101_6
unknown

Not on your lists

comp(3459..3773)
-----------------
DNA (315bp)
protein (105aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH Tax=AR20
LSU ribosomal protein L44E
rifcsphigho2_02_scaffold_2101_7

Not on your lists

comp(3770..4348)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH id=5103149 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62430.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2101_8

Not on your lists

4433..5392
-----------------
DNA (960bp)
protein (320aa)
truD; tRNA pseudouridine synthase D; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5042278 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO46776.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO46776.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
rifcsphigho2_02_scaffold_2101_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5373..6356)
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F30CA
ATPase, AAA-type, core Tax=AR15
rifcsphigho2_02_scaffold_2101_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

6443..7546
-----------------
DNA (1104bp)
protein (368aa)
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=AR17
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle GTPase
rifcsphigho2_02_scaffold_2101_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

7863..8009
-----------------
DNA (147bp)
protein (49aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
Uncharacterized protein id=5800244 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2101_12

Not on your lists

8062..8976
-----------------
DNA (915bp)
protein (305aa)
hypothetical protein
id=5045285 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54492.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_2101_13
unknown

Not on your lists

8954..9862
-----------------
DNA (909bp)
protein (303aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_14
unknown

Not on your lists

comp(9910..10104)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_15

Not on your lists


10175..11521
-----------------
DNA (1347bp)
protein (449aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
SRP54-type protein, GTPase protein
rifcsphigho2_02_scaffold_2101_16
unknown

Not on your lists

11686..11850
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_17
unknown

Not on your lists

11857..12456
-----------------
DNA (600bp)
protein (200aa)
Putative uncharacterized protein n=1 Tax=Nosema ceranae (strain BRL01) RepID=C4V6R8_NOSCE id=5103153 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Nosema ceranae (strain BRL01) RepID=C4V6R8_NOSCE Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_2101_18
unknown

Not on your lists

12581..12904
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_trna_1
unknown

Not on your lists

13158..13271
-----------------
DNA (114bp)
transferRNA
rifcsphigho2_02_scaffold_2101_19
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

13308..13688
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037AC348
hypothetical protein Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Translation elongation factor-like protein
rifcsphigho2_02_scaffold_2101_20
unknown

Not on your lists

13803..14216
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_21
unknown

Not on your lists


14223..14678
-----------------
DNA (456bp)
protein (152aa)
30S ribosomal protein S15/S13e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6T6_KORCO id=5103093 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S15/S13e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L6T6_KORCO Tax=AR20
30S ribosomal protein S15/S13e
rifcsphigho2_02_scaffold_2101_22

Not on your lists

14680..16059
-----------------
DNA (1380bp)
protein (460aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein
Phosphoesterase, RecJ-like protein {ECO:0000313|EMBL:AJF62373.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2101_23

Not on your lists


16095..16667
-----------------
DNA (573bp)
protein (191aa)
SSU ribosomal protein S3AE n=1 Tax=nanoarchaeote Nst1 RepID=R1E4Q5_9ARCH id=5103091 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SSU ribosomal protein S3AE
SSU ribosomal protein S3AE {ECO:0000313|EMBL:AJF62372.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2101_24
unknown

Not on your lists

comp(16884..17039)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_25
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

comp(17093..17281)
-----------------
DNA (189bp)
protein (63aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003713826
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
rifcsphigho2_02_scaffold_2101_26
unknown

Not on your lists

comp(17548..17673)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2101_27
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

18218..20149
-----------------
DNA (1932bp)
protein (644aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_2101_28
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

20088..28196
-----------------
DNA (8109bp)
protein (2703aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Lytic murein transglycosylase Tax=CG_Pacearch_01
rifcsphigho2_02_scaffold_2101_29
unknown

Not on your lists

28275..28952
-----------------
DNA (678bp)
protein (226aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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