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rifcsphigho2_02_scaffold_2646

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2646_1
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

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2..256
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS13605.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
rifcsphigho2_02_scaffold_2646_2

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404..1441
-----------------
DNA (1038bp)
protein (346aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6D6_METSL id=5102884 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AJF62165.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2646_3
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

1531..2262
-----------------
DNA (732bp)
protein (244aa)
Xylene monooxygenase electron transfer component-like protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466S4_METBF
xylene monooxygenase electron transfer component Tax=GWA2_WOR_2_47_8_curated
Sulfhydrogenase 1 subunit gamma
rifcsphigho2_02_scaffold_2646_4
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

2424..3035
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Uncharacterized protein id=3932665 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rifcsphigho2_02_scaffold_2646_5
unknown

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3223..3603
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2646_6
unknown

Not on your lists

3634..4284
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2646_7
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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comp(4291..5112)
-----------------
DNA (822bp)
protein (274aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=35466 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
UDP-glucose/GDP-mannose dehydrogenase dimerization Tax=RIFOXYB2_FULL_RIF07_49_35_curated
UDP-glucose 6-dehydrogenase
rifcsphigho2_02_scaffold_2646_8
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(5119..5826)
-----------------
DNA (708bp)
protein (236aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=469606 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P5C3_FUSNV
rifcsphigho2_02_scaffold_2646_9

Not on your lists

5953..6459
-----------------
DNA (507bp)
protein (169aa)
Ribonuclease P protein component 3 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A3Q0_THESM id=5103831 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease P protein component 3
Ribonuclease P protein component 3 {ECO:0000313|EMBL:AJF63109.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2646_10
unknown

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6485..6655
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2646_11

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6736..9951
-----------------
DNA (3216bp)
protein (1072aa)
Peptidase S8/S53 id=4688818 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48415.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
subtilisin
rifcsphigho2_02_scaffold_2646_12
unknown

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comp(9948..10373)
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2646_13
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10529..11167)
-----------------
DNA (639bp)
protein (213aa)
glutamine amidotransferases class-II Tax=GWB2_Ignavibacteria_35_6b_curated
Glutamine amidotransferases class-II id=5800347 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
glutamine amidotransferases class-II
rifcsphigho2_02_scaffold_2646_14
unknown

Not on your lists

11412..12392
-----------------
DNA (981bp)
protein (327aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2646_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12410..15001)
-----------------
DNA (2592bp)
protein (864aa)
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Woesearch_02
DEAD/H associated domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7W5_METSW id=5103576 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/H associated protein
rifcsphigho2_02_scaffold_2646_16
GWA2_OD1_36_10, Parcubacteria, Bacteria

Not on your lists

comp(15091..15873)
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein Tax=GWA2_OD1_36_10
rifcsphigho2_02_scaffold_2646_trna_1
unknown

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comp(16115..16189)
-----------------
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_2646_17
GWC2_OP11P37_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(16210..16482)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKQ25223.1}; TaxID=1618486 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_37_13.;"
Uncharacterized protein id=5801993 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
rifcsphigho2_02_scaffold_2646_18

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16924..17076
-----------------
DNA (153bp)
protein (51aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I717_METCZ id=5103534 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62815.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2646_19
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

17243..18196
-----------------
DNA (954bp)
protein (318aa)
id=5096704 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Tax=PER_GWF2_39_17
rifcsphigho2_02_scaffold_2646_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18174..19322
-----------------
DNA (1149bp)
protein (383aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|SAAS:SAAS00075163};; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrion
Nicotinic acid phosphoribosyltransferase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6G9J9_9DELT
hypothetical protein
rifcsphigho2_02_scaffold_2646_21
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19332..20123
-----------------
DNA (792bp)
protein (264aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RBG_13_Deltaproteobacteria_65_10_curated
Isochorismatase hydrolase id=2010413 bin=GWB2_CP_45_9 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
isochorismatase hydrolase
rifcsphigho2_02_scaffold_2646_22
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

20120..21013
-----------------
DNA (894bp)
protein (298aa)
nadE; NAD synthetase (EC:6.3.5.1)
NH(3)-dependent NAD(+) synthetase id=5800722 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
NH(3)-dependent NAD(+) synthetase Tax=AR15
rifcsphigho2_02_scaffold_2646_23
S_Thermodesulfobacterium_commune_37_35, Thermodesulfbacterales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

21006..21473
-----------------
DNA (468bp)
protein (156aa)
inositol phosphatase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B3843E
Inositol monophosphatase Tax=S_Thermodesulfobacterium_commune_37_35
inositol monophosphatase
rifcsphigho2_02_scaffold_2646_24
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

21470..22090
-----------------
DNA (621bp)
protein (207aa)
Nucleotidylyl transferase id=5800724 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nucleotidylyl transferase Tax=AR15
rifcsphigho2_02_scaffold_2646_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

22092..22859
-----------------
DNA (768bp)
protein (256aa)
Serine/threonine protein kinase id=5800725 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Serine/threonine protein kinase Tax=AR15
serine/threonine protein kinase
rifcsphigho2_02_scaffold_2646_26
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

22915..23895
-----------------
DNA (981bp)
protein (327aa)
Putative uncharacterized protein id=5800726 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_2646_27

Not on your lists

23932..24843
-----------------
DNA (912bp)
protein (304aa)
Pyruvate/Phosphoenolpyruvate kinase id=5800727 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62057.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_2646_28
unknown

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24840..25769
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2646_29
GWA1_OP11_43_12, Woesebacteria, Microgenomates, Bacteria

Not on your lists

25762..25977
-----------------
DNA (216bp)
protein (72aa)
Quinolinate synthetase complex, A subunit {ECO:0000313|EMBL:KKS90919.1}; TaxID=1618557 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_43_12.;"
Displaying 30 items

View Taxonomy