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rifcsphigho2_02_scaffold_21773

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_21773_1
unknown

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68..259
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21773_2
unknown

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comp(368..1135)
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21773_3
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1137..1961)
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJU1_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83223.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum
rifcsphigho2_02_scaffold_21773_4
CG_Pacearch_02, Pacearchaeota, Archaea

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2049..3284
-----------------
DNA (1236bp)
protein (412aa)
integrase catalytic region Tax=CG_Pacearch_02
Integrase catalytic region id=5049659 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transposase
rifcsphigho2_02_scaffold_21773_5
unknown

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3353..3712
-----------------
DNA (360bp)
protein (120aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PM40_9ZZZZ id=5103652 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PM40_9ZZZZ Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_21773_6
unknown

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3726..4313
-----------------
DNA (588bp)
protein (196aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY id=5103653 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY Tax=AR20
DNA-directed RNA polymerase subunit E
rifcsphigho2_02_scaffold_21773_7

Not on your lists

4315..4497
-----------------
DNA (183bp)
protein (61aa)
DNA-directed RNA polymerase, subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY id=5103654 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase, subunit E
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_21773_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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4499..4801
-----------------
DNA (303bp)
protein (101aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
30S ribosomal protein S24
rifcsphigho2_02_scaffold_21773_9

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4829..5011
-----------------
DNA (183bp)
protein (61aa)
30S ribosomal protein S27ae n=3 Tax=Archaea RepID=K0INM2_NITGG id=5103656 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000313|EMBL:AJF62937.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_21773_10
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5012..5839)
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein
id=5103732 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_21773_11
unknown

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comp(5836..7599)
-----------------
DNA (1764bp)
protein (588aa)

This feature has no annotations

rifcsphigho2_02_scaffold_21773_12
AR20, Woesearchaeaota, DPANN, Archaea

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comp(7613..7861)
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364AA3A
hypothetical protein
Tax=AR20
Displaying 12 items

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