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rifcsphigho2_02_scaffold_1868

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1868_1
unknown

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1..264
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_2
unknown

Not on your lists

381..896
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_3
unknown

Not on your lists

893..4375
-----------------
DNA (3483bp)
protein (1161aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_4
unknown

Not on your lists

4376..5164
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_5
unknown

Not on your lists

5166..5786
-----------------
DNA (621bp)
protein (207aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_6
unknown

Not on your lists

5780..6373
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_7
unknown

Not on your lists

6370..7140
-----------------
DNA (771bp)
protein (257aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_8

Not on your lists

7130..11581
-----------------
DNA (4452bp)
protein (1484aa)
Subtilisin-like serine proteases n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RBJ2_THETN id=5103550 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Subtilisin-like protein serine protease
Subtilisin-like protein serine protease {ECO:0000313|EMBL:AJF62831.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_1868_9

Not on your lists

11876..12310
-----------------
DNA (435bp)
protein (145aa)
IS200-type transposase; K07491 putative transposase id=5047348 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54126.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
transposase IS200-family protein
rifcsphigho2_02_scaffold_1868_10
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(12363..12785)
-----------------
DNA (423bp)
protein (141aa)
Signal transduction response regulator {ECO:0000313|EMBL:CDR33170.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
rifcsphigho2_02_scaffold_1868_11
unknown

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comp(12800..13744)
-----------------
DNA (945bp)
protein (315aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_12

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13817..14596
-----------------
DNA (780bp)
protein (260aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
transcriptional regulator TrmB
Marine sediment metagenome DNA, contig: S12H4_S03624 {ECO:0000313|EMBL:GAI93971.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_1868_13
unknown

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comp(14601..15884)
-----------------
DNA (1284bp)
protein (428aa)
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA Tax=AR20
Elongation factor 1-alpha
rifcsphigho2_02_scaffold_1868_14

Not on your lists

comp(16362..16670)
-----------------
DNA (309bp)
protein (103aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:KHO52000.1}; EC=2.1.1.63 {ECO:0000313|EMBL:KHO52000.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cysteine methyltransferase
rifcsphigho2_02_scaffold_1868_15
unknown

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16764..18968
-----------------
DNA (2205bp)
protein (735aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_16
unknown

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comp(19060..19515)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_17
AR20, Woesearchaeaota, DPANN, Archaea

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19577..19717
-----------------
DNA (141bp)
protein (47aa)
Tax=AR20
rifcsphigho2_02_scaffold_1868_18

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comp(19788..20675)
-----------------
DNA (888bp)
protein (296aa)
Predicted GTPase of the OBG/HflX superfamily n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TW38_METKA id=5103555 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative GTPase of the OBG/HflX superfamily
Putative GTPase of the OBG/HflX superfamily {ECO:0000313|EMBL:AJF62836.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_1868_19
unknown

Not on your lists

comp(20795..21091)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_20
GWA1_OD1_40_21, Parcubacteria, Bacteria

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21216..22733
-----------------
DNA (1518bp)
protein (506aa)
tme:Tmel_1578 inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37); K00088 IMP dehydrogenase [EC:1.1.1.205] id=8144 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Inosine-5'-monophosphate dehydrogenase Tax=GWA1_OD1_40_21
Inosine-5'-monophosphate dehydrogenase
rifcsphigho2_02_scaffold_1868_21

Not on your lists

22724..24178
-----------------
DNA (1455bp)
protein (485aa)
hmo:HM1_0977 purA; adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4] id=8143 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00
adenylosuccinate synthetase (EC:6.3.4.4)
rifcsphigho2_02_scaffold_1868_22
unknown

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comp(24220..24843)
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_23
unknown

Not on your lists

comp(24845..25480)
-----------------
DNA (636bp)
protein (212aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_24
unknown

Not on your lists

25514..26038
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_25
archaeon Loki, Lokiarchaeota, Archaea

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comp(26131..26883)
-----------------
DNA (753bp)
protein (251aa)
mtnP; S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
S-methyl-5'-thioadenosine phosphorylase {ECO:0000313|EMBL:KKK44479.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
rifcsphigho2_02_scaffold_1868_26
unknown

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comp(26886..29309)
-----------------
DNA (2424bp)
protein (808aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1868_27
unknown

Not on your lists

29418..30242
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized membrane protein n=1 Tax=nanoarchaeote Nst1 RepID=R1FUH2_9ARCH id=5103440 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized membrane protein n=1 Tax=nanoarchaeote Nst1 RepID=R1FUH2_9ARCH Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_1868_28
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

30291..30662
-----------------
DNA (372bp)
protein (124aa)
MazG nucleotide pyrophosphohydrolase id=3210125 bin=GWB1_Berkelbacteria_38_5 species=Brevibacillus sp. BC25 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:KKQ18853.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
rifcsphigho2_02_scaffold_1868_29
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(30728..31153)
-----------------
DNA (426bp)
protein (142aa)
Putative Fe-S oxidoreductase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKK2_IGNAJ
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AFH49509.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibac
Displaying 29 items

View Taxonomy