ggKbase home page

rifcsphigho2_02_scaffold_4804_23

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_32_10

partial RP 35 / 55 MC: 4 BSCG 13 / 51 ASCG 30 / 38 MC: 2
Location: comp(15486..16343)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 285.0
  • Bit_score: 347
  • Evalue 1.30e-92
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 286.0
  • Bit_score: 347
  • Evalue 9.30e-93
RNAse Z similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 285.0
  • Bit_score: 347
  • Evalue 2.60e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR20 → Archaea

Sequences

DNA sequence
Length: 858
ATGTTGCCGACAAAAGAAAGGAACCATAACGCCGTATTTATTAAATACAAAAATGAAGGTTTACTGGTAGATTGTGGTGAAGGCACCCAAAGACAGTTTAGATTAGCAGACATTCCAACAACAAAAGTAACAAAACTGCTTATAACACATTTCCACGGAGATCATGTACTCGGAATTTTAGGATTAATACAAAGCCTTGGGGCAAATAACTACAAAAATAAACTGGAGATTTACGGCCCTAAGAACACAAAGCATTACATAAAGAACATGCTGTCATCAATAATATTCAAGAACAAGATAAGAATGGAAATAACTGAGATTACAAAACCAGGGATATTTTTTGAAAATAAGGATTTTATTCTTGAATCAGCACAATTAGAACATTCTATATATTGCTTGGGTTATTCATTTATAGAAAAAGACACAAGAAATGTTAACGTAAGTTATACCAAAAAATTCGGCCTTACAAGGCATCCATTGCTCGGAAACCTGCAGAAAGGTAAGAACATAACATACATGGGCCAAAAAATAGAAGCAGATAAGGCAACGACAATAAAAAAAGGAAAGAAGATAACGATAATACTTGACACATTGCCAACAAAAAATGCAGTAACATTAGCTAAAGACTCAGATATCCTGATTGCAGATTCAACATGGTCTTACAAACAGGAAAAAGCAAGTGGTGAACATCTCACCAACATGGATGCGGCAAATCTAGCAAAAGATTCAAACTCAAAAAAGCTCATATTGACGCATTTCTCCCAAAGATATAAAAACGTTGATGACTTAAAAGAAGAGATCAAAGATGTCTTTAAAGAAACAATCACAGCAAAGGACCTTATGGAGATAGAAATATGA
PROTEIN sequence
Length: 286
MLPTKERNHNAVFIKYKNEGLLVDCGEGTQRQFRLADIPTTKVTKLLITHFHGDHVLGILGLIQSLGANNYKNKLEIYGPKNTKHYIKNMLSSIIFKNKIRMEITEITKPGIFFENKDFILESAQLEHSIYCLGYSFIEKDTRNVNVSYTKKFGLTRHPLLGNLQKGKNITYMGQKIEADKATTIKKGKKITIILDTLPTKNAVTLAKDSDILIADSTWSYKQEKASGEHLTNMDAANLAKDSNSKKLILTHFSQRYKNVDDLKEEIKDVFKETITAKDLMEIEI*