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rifcsphigho2_02_scaffold_4804

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4804_1
AR11, Woesearchaeaota, DPANN, Archaea

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comp(2..181)
-----------------
DNA (180bp)
protein (60aa)
Tax=AR11
rifcsphigho2_02_scaffold_4804_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(184..1725)
-----------------
DNA (1542bp)
protein (514aa)
DNA methyltransferase n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D815F
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:AFU59832.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargen
rifcsphigho2_02_scaffold_4804_3
unknown

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comp(1896..2114)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4804_4

Not on your lists

comp(2170..2556)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Lens) RepID=Q5WSK9_LEGPL
Marine sediment metagenome DNA, contig: S06H3_S14570 {ECO:0000313|EMBL:GAI41058.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Transposase
rifcsphigho2_02_scaffold_4804_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(2667..3128)
-----------------
DNA (462bp)
protein (154aa)
Marine sediment metagenome DNA, contig: S01H1_L02875 Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_4804_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3219..4448)
-----------------
DNA (1230bp)
protein (410aa)
filamentation induced by cAMP protein fic Tax=RBG_13_Pacearchaeota_36_9_curated
filamentation induced by cAMP protein fic id=5047359 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_4804_7

Not on your lists

comp(4525..5016)
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM19613.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_02_scaffold_4804_8
unknown

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comp(5443..5667)
-----------------
DNA (225bp)
protein (75aa)
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY id=5103084 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Like-Sm ribonucleoprotein core n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEN0_9EURY Tax=AR20
Like-Sm ribonucleoprotein core
rifcsphigho2_02_scaffold_4804_9
unknown

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5724..6101
-----------------
DNA (378bp)
protein (126aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO Tax=AR20
30S ribosomal protein S8e
rifcsphigho2_02_scaffold_4804_10

Not on your lists

6159..6479
-----------------
DNA (321bp)
protein (107aa)
id=5048719 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45382.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_4804_11

Not on your lists

6621..6821
-----------------
DNA (201bp)
protein (67aa)
id=5048720 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45383.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_4804_12

Not on your lists

6818..7291
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45384.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
id=5048721 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_4804_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(7267..8157)
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein id=5048722 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_4804_14

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8203..8571
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein
id=5048723 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45386.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_4804_15

Not on your lists

comp(8558..9784)
-----------------
DNA (1227bp)
protein (409aa)
nickel-dependent hydrogenase id=5048725 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nickel-dependent hydrogenase {ECO:0000313|EMBL:KHO45388.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
nickel-dependent hydrogenase
rifcsphigho2_02_scaffold_4804_16

Not on your lists

comp(9723..10376)
-----------------
DNA (654bp)
protein (218aa)
sulfhydrogenase subunit delta id=5048726 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Sulfhydrogenase subunit delta {ECO:0000313|EMBL:KHO45389.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
sulfhydrogenase II subunit delta
rifcsphigho2_02_scaffold_4804_17

Not on your lists

comp(10394..11191)
-----------------
DNA (798bp)
protein (266aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein id=5048727 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:KHO45390.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
sulfite reductase subunit B
rifcsphigho2_02_scaffold_4804_18

Not on your lists

comp(11206..12177)
-----------------
DNA (972bp)
protein (324aa)
putative anaerobic sulfite reductase, A subunit id=5048728 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45391.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
anaerobic sulfite reductase subunit A
rifcsphigho2_02_scaffold_4804_19
unknown

Not on your lists

12426..13391
-----------------
DNA (966bp)
protein (322aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4804_20
unknown

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13553..14479
-----------------
DNA (927bp)
protein (309aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU Tax=AR20
Transcription initiation factor IIB
rifcsphigho2_02_scaffold_4804_21
unknown

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14500..15288
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4804_22
unknown

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comp(15298..15489)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4804_23

Not on your lists

comp(15486..16343)
-----------------
DNA (858bp)
protein (286aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
rifcsphigho2_02_scaffold_4804_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

16445..17017
-----------------
DNA (573bp)
protein (191aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
rifcsphigho2_02_scaffold_4804_25

Not on your lists

17147..18127
-----------------
DNA (981bp)
protein (327aa)
hypothetical protein
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62334.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_4804_26
unknown

Not on your lists

18201..19274
-----------------
DNA (1074bp)
protein (358aa)
RNA methylase n=3 Tax=Sulfolobus acidocaldarius RepID=Q4J9A5_SULAC id=5103052 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase n=3 Tax=Sulfolobus acidocaldarius RepID=Q4J9A5_SULAC Tax=AR20
RNA methylase
rifcsphigho2_02_scaffold_4804_27
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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19309..19497
-----------------
DNA (189bp)
protein (63aa)
30S ribosomal protein S17e n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PX41_METTM
rps17e; 30S ribosomal protein S17e
Tax=BJP_IG2069_Methanobacteriales_33_27
rifcsphigho2_02_scaffold_4804_28
unknown

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19936..20151
-----------------
DNA (216bp)
protein (72aa)
DNA/RNA-binding protein Alba n=2 Tax=Methanotorris RepID=F6BCD3_METIK id=5103050 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA/RNA-binding protein Alba n=2 Tax=Methanotorris RepID=F6BCD3_METIK Tax=AR20
DNA/RNA-binding protein Alba
rifcsphigho2_02_scaffold_4804_29
unknown

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20214..20681
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4804_30
R_OP11_Levybacteria_37_17, Levybacteria, Microgenomates, Bacteria

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20946..22631
-----------------
DNA (1686bp)
protein (562aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C82BB
sodium/hydrogen exchanger Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_17_curated
Transporter, CPA2 family
Displaying items 1-30 of 39 in total

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