ggKbase home page

rifcsphigho2_02_scaffold_4421

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4421_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1..657)
-----------------
DNA (657bp)
protein (219aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_4421_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(852..1172)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
translation initiation factor IF-1; K03236 translation initiation factor 1A Tax=RBG_13_Woesearchaeota_36_6_curated
Translation initiation factor 1A
rifcsphigho2_02_scaffold_4421_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

1312..2127
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein Tax=AR9
Putative uncharacterized protein id=5041674 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
exodeoxyribonuclease V subunit beta
rifcsphigho2_02_scaffold_4421_4
unknown

Not on your lists

comp(2133..2510)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4421_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2553..3461)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized membrane protein id=5042271 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsphigho2_02_scaffold_4421_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

3580..4446
-----------------
DNA (867bp)
protein (289aa)
M48 family peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Protease HtpX homolog n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFD7_HYDTT
HtpX-2 peptidase
rifcsphigho2_02_scaffold_4421_7
unknown

Not on your lists

4447..4830
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4421_8
unknown

Not on your lists

4814..5206
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4421_9

Not on your lists

comp(5193..6536)
-----------------
DNA (1344bp)
protein (448aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50190.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_4421_10
unknown

Not on your lists

comp(6609..7439)
-----------------
DNA (831bp)
protein (277aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4421_11

Not on your lists

comp(7573..8904)
-----------------
DNA (1332bp)
protein (444aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1579369 species="Archaea.;" sourc
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_4421_12

Not on your lists

9472..10629
-----------------
DNA (1158bp)
protein (386aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZMW0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD50481.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_02_scaffold_4421_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

10691..11401
-----------------
DNA (711bp)
protein (237aa)
Non-specific serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] Tax=AR9
Serine/threonine protein kinase involved in cell cycle control id=5800010 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rio-like kinase
rifcsphigho2_02_scaffold_4421_14

Not on your lists


11404..11952
-----------------
DNA (549bp)
protein (183aa)
KH domain protein id=4913579 bin=GWC2_Clostridiales_40_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Uncharacterized protein {ECO:0000313|EMBL:KHO50184.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
KH domain protein
rifcsphigho2_02_scaffold_4421_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12054..13811
-----------------
DNA (1758bp)
protein (586aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=AR9
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_4421_16

Not on your lists

13845..14954
-----------------
DNA (1110bp)
protein (370aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Type 2 DNA topoisomerase 6 subunit A
rifcsphigho2_02_scaffold_4421_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14976..15827
-----------------
DNA (852bp)
protein (284aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YTS6_MYCSD
Uncharacterized protein {ECO:0000313|EMBL:KFA90735.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
rifcsphigho2_02_scaffold_4421_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

15830..16387
-----------------
DNA (558bp)
protein (186aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IQ07_9FIRM
ppiB; peptidyl-prolyl cis-trans isomerase Tax=CG_Pacearch_03
ppiA; peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_4421_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16391..17017)
-----------------
DNA (627bp)
protein (209aa)
Tax=AR9
rifcsphigho2_02_scaffold_4421_20
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17254..17607
-----------------
DNA (354bp)
protein (118aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsphigho2_02_scaffold_4421_21
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

17652..18380
-----------------
DNA (729bp)
protein (243aa)
Tax=AR9
rifcsphigho2_02_scaffold_4421_22
unknown

Not on your lists

comp(18381..18737)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4421_trna_1
unknown

Not on your lists

18839..18911
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_4421_23
unknown

Not on your lists

18983..19699
-----------------
DNA (717bp)
protein (239aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4421_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

19743..20831
-----------------
DNA (1089bp)
protein (363aa)
Fibronectin-binding A domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN09_ARCVS
fibronectin-binding protein Tax=AR9
fibronectin-binding A domain-containing protein
rifcsphigho2_02_scaffold_4421_25
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

20847..21575
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein Tax=AR9
Uncharacterized protein id=5799956 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_4421_26
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

21718..22425
-----------------
DNA (708bp)
protein (236aa)
Succinylglutamate desuccinylase/aspartoacylase (Fragment) id=5799936 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Succinylglutamate desuccinylase/aspartoacylase (Fragment) Tax=AR15
succinylglutamate desuccinylase
rifcsphigho2_02_scaffold_4421_27
unknown

Not on your lists

22484..23596
-----------------
DNA (1113bp)
protein (371aa)
Tryptophan--tRNA ligase n=4 Tax=Candidatus Nitrosoarchaeum RepID=F3KN87_9ARCH id=5103645 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tryptophan--tRNA ligase n=4 Tax=Candidatus Nitrosoarchaeum RepID=F3KN87_9ARCH Tax=AR20
Tryptophan-tRNA ligase
rifcsphigho2_02_scaffold_4421_28
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

23644..24195
-----------------
DNA (552bp)
protein (184aa)
Tax=CG_Pacearch_05
rifcsphigho2_02_scaffold_4421_29
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

24483..24929
-----------------
DNA (447bp)
protein (149aa)
Tax=AR9
Displaying items 1-30 of 35 in total

View Taxonomy