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rifcsphigho2_02_scaffold_20337

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_20337_1
unknown

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comp(1..120)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20337_2

Not on your lists


362..1060
-----------------
DNA (699bp)
protein (233aa)
Small subunit ribosomal protein S3Ae {ECO:0000313|EMBL:KHO49067.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
rifcsphigho2_02_scaffold_20337_3
AR9, Woesearchaeaota, DPANN, Archaea

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1086..1682
-----------------
DNA (597bp)
protein (199aa)
metallophosphoesterase; K07096 Tax=AR9
metallophosphoesterase; K07096 id=5050977 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Metallophosphoesterase
rifcsphigho2_02_scaffold_20337_4

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comp(1716..2651)
-----------------
DNA (936bp)
protein (312aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
rifcsphigho2_02_scaffold_20337_5
unknown

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comp(2687..3049)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20337_6

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comp(3051..3449)
-----------------
DNA (399bp)
protein (133aa)
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsphigho2_02_scaffold_20337_7

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comp(3656..4105)
-----------------
DNA (450bp)
protein (150aa)
Small subunit ribosomal protein S19e {ECO:0000313|EMBL:KHO49523.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps19E; 30S ribosomal protein S19e
rifcsphigho2_02_scaffold_20337_8
AR9, Woesearchaeaota, DPANN, Archaea

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4346..4885
-----------------
DNA (540bp)
protein (180aa)
Tax=AR9
rifcsphigho2_02_scaffold_20337_9
unknown

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4887..5690
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20337_10
AR9, Woesearchaeaota, DPANN, Archaea

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5743..7086
-----------------
DNA (1344bp)
protein (448aa)
Tax=AR9
rifcsphigho2_02_scaffold_20337_11
unknown

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comp(7087..8196)
-----------------
DNA (1110bp)
protein (370aa)

This feature has no annotations

Displaying 11 items

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