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rifcsphigho2_02_scaffold_13215

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_13215_1
unknown

Not on your lists

comp(3..173)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_2
unknown

Not on your lists

comp(240..872)
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(958..1191)
-----------------
DNA (234bp)
protein (78aa)
50S ribosomal protein L35Ae; K02917 large subunit ribosomal protein L35Ae Tax=AR9
rifcsphigho2_02_scaffold_13215_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

1457..2971
-----------------
DNA (1515bp)
protein (505aa)
hypothetical protein; K06915 Tax=AR9
Putative ATPase id=5799867 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATPase
rifcsphigho2_02_scaffold_13215_5

Not on your lists

3054..3920
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49532.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_13215_6
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

3960..4328
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
hypothetical protein id=92115 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsphigho2_02_scaffold_13215_7
unknown

Not on your lists

4303..4551
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_8
unknown

Not on your lists

comp(4637..5041)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5064..5867)
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein Tax=AR9
Metal-dependent hydrolase, beta-lactamase superfamily III id=5799925 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
metal-dependent hydrolase, beta-lactamase superfamily III
rifcsphigho2_02_scaffold_13215_10

Not on your lists

5996..6988
-----------------
DNA (993bp)
protein (331aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN22498.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_02_scaffold_13215_11
unknown

Not on your lists

6991..7434
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_12

Not on your lists

7477..9090
-----------------
DNA (1614bp)
protein (538aa)
Thermosome, chaperonin Cpn60/TCP-1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRK6_9EURY id=5103700 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Thermosome subunit beta {ECO:0000313|EMBL:KHO49536.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Thermosome, chaperonin Cpn60/TCP-1
rifcsphigho2_02_scaffold_13215_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

9132..10568
-----------------
DNA (1437bp)
protein (479aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=AR9
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0P5_CLONN
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
rifcsphigho2_02_scaffold_13215_14
unknown

Not on your lists

comp(10587..11366)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_15
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11456..12082
-----------------
DNA (627bp)
protein (209aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UH03_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC48261.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
rifcsphigho2_02_scaffold_13215_trna_1
unknown

Not on your lists

12137..12208
-----------------
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_13215_16
unknown

Not on your lists

comp(12148..12927)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


13152..14429
-----------------
DNA (1278bp)
protein (426aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=AR9
Histidine--tRNA ligase id=5799824 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histidine-tRNA ligase
rifcsphigho2_02_scaffold_13215_18
unknown

Not on your lists

14437..14607
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13215_19
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

14662..15219
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein; K03975 membrane-associated protein Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
Putative membrane-associated protein id=4366108 bin=GWF2_Melioribacter_38_21 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
putative membrane-associated protein
rifcsphigho2_02_scaffold_13215_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15290..16201)
-----------------
DNA (912bp)
protein (304aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=AR9
Methionine aminopeptidase n=2 Tax=Thermococcus onnurineus RepID=B6YTG0_THEON
methionine aminopeptidase
rifcsphigho2_02_scaffold_13215_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

16358..16798
-----------------
DNA (441bp)
protein (147aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase Tax=CG_Pacearch_03
FKBP-type peptidylprolyl isomerase
rifcsphigho2_02_scaffold_13215_22
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16912..17184
-----------------
DNA (273bp)
protein (91aa)
cold-shock protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003672520
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KKQ84172.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
cold shock protein
rifcsphigho2_02_scaffold_13215_23
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17247..19004)
-----------------
DNA (1758bp)
protein (586aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z395_9BACT
Nucleoside-diphosphate-sugar pyrophosphorylase family protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Displaying 24 items

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