ggKbase home page

rifcsphigho2_02_scaffold_12337

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12337_1

Not on your lists

comp(3..2444)
-----------------
DNA (2442bp)
protein (814aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
rifcsphigho2_02_scaffold_12337_2
unknown

Not on your lists

comp(2549..3682)
-----------------
DNA (1134bp)
protein (378aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12337_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3723..4268)
-----------------
DNA (546bp)
protein (182aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_12337_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(4271..5194)
-----------------
DNA (924bp)
protein (308aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
rifcsphigho2_02_scaffold_12337_5
unknown

Not on your lists

5299..6324
-----------------
DNA (1026bp)
protein (342aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12337_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6316..7119)
-----------------
DNA (804bp)
protein (268aa)
Ribonuclease id=5800785 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribonuclease Tax=AR15
ribonuclease HIII
rifcsphigho2_02_scaffold_12337_7
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

7218..7784
-----------------
DNA (567bp)
protein (189aa)
Ribosomal RNA adenine dimethylase domain-containing protein id=4034452 bin=GWF2_Lentisphaerae_52_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
methyltransferase Tax=GWF2_Lentisphaerae_52_8_curated
ribosomal RNA adenine dimethylase domain protein
rifcsphigho2_02_scaffold_12337_8
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7826..8407)
-----------------
DNA (582bp)
protein (194aa)
LemA protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E496_CARML
lemA protein
LemA protein {ECO:0000313|EMBL:CCO11225.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium maltaromaticum LMA28.;"
rifcsphigho2_02_scaffold_12337_9
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(8446..9375)
-----------------
DNA (930bp)
protein (310aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CWX0_9BACT
hypothetical protein; K06872 uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
hypothetical protein
rifcsphigho2_02_scaffold_12337_10
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(9388..9726)
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein AF_1598 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1598_ARCFU
hypothetical protein Tax=RBG_16_Planctomycetes_43_13_curated
hypothetical protein
rifcsphigho2_02_scaffold_12337_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9788..10498)
-----------------
DNA (711bp)
protein (237aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ribonuclease
rifcsphigho2_02_scaffold_12337_12
unknown

Not on your lists

comp(10556..10999)
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12337_13
unknown

Not on your lists

comp(10999..11124)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

Displaying 13 items

View Taxonomy