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rifcsphigho2_02_scaffold_12567

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12567_1
unknown

Not on your lists

3..125
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(135..449)
-----------------
DNA (315bp)
protein (105aa)
Tax=AR9
rifcsphigho2_02_scaffold_12567_3
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(461..1216)
-----------------
DNA (756bp)
protein (252aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_02_scaffold_12567_4
unknown

Not on your lists

comp(1273..1566)
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_5

Not on your lists

1667..1936
-----------------
DNA (270bp)
protein (90aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5044918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RNA polymerase dimerization
rifcsphigho2_02_scaffold_12567_6
unknown

Not on your lists

1955..2434
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_7

Not on your lists

2480..3811
-----------------
DNA (1332bp)
protein (444aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5041758 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO49843.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein
rifcsphigho2_02_scaffold_12567_8
unknown

Not on your lists

3855..4169
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_9
unknown

Not on your lists

4209..4757
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

4878..5999
-----------------
DNA (1122bp)
protein (374aa)
Tax=CG_Pacearch_06
rifcsphigho2_02_scaffold_12567_11
unknown

Not on your lists

5996..6571
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_12
GWC2_OD1_42_6_partial, Parcubacteria, Bacteria

Not on your lists

6745..7128
-----------------
DNA (384bp)
protein (128aa)
Putative uncharacterized protein n=1 Tax=uncultured Planctomycetales bacterium HF0200_11L05 RepID=E7C3U9_9BACT
Putative uncharacterized protein Tax=GWC2_OD1_42_6_partial
rifcsphigho2_02_scaffold_12567_13
unknown

Not on your lists

7207..7524
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12567_14

Not on your lists


7665..8183
-----------------
DNA (519bp)
protein (173aa)
30S ribosomal protein S13 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RS13_PYRHO
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rps13p; 30S ribosomal protein S13
rifcsphigho2_02_scaffold_12567_15

Not on your lists


8191..8838
-----------------
DNA (648bp)
protein (216aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RS4_THEKO
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rps4p; 30S ribosomal protein S4
rifcsphigho2_02_scaffold_12567_16

Not on your lists


8841..9287
-----------------
DNA (447bp)
protein (149aa)
30S ribosomal protein S11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365FC94
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rps11p; 30S ribosomal protein S11P
rifcsphigho2_02_scaffold_12567_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

9331..10107
-----------------
DNA (777bp)
protein (259aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR9
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D
rifcsphigho2_02_scaffold_12567_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


10123..10482
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18; K02883 large subunit ribosomal protein L18e Tax=AR9
50S ribosomal protein L18e
rifcsphigho2_02_scaffold_12567_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


10491..10916
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L13 n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A247_THEGJ
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR9
50S ribosomal protein L13
rifcsphigho2_02_scaffold_12567_20

Not on your lists


10918..11322
-----------------
DNA (405bp)
protein (135aa)
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5048340 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S9
Displaying 20 items

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