ggKbase home page

rifcsphigho2_02_scaffold_14979

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_14979_1

Not on your lists

comp(1..321)
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51237.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_14979_2
unknown

Not on your lists

413..745
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14979_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(785..2170)
-----------------
DNA (1386bp)
protein (462aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR9
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
rifcsphigho2_02_scaffold_14979_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(2172..2648)
-----------------
DNA (477bp)
protein (159aa)
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 Tax=AR9
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=5042323 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl15p; 50S ribosomal protein L15P
rifcsphigho2_02_scaffold_14979_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(2666..3091)
-----------------
DNA (426bp)
protein (142aa)
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=AR9
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl30p; 50S ribosomal protein L30
rifcsphigho2_02_scaffold_14979_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(3113..3892)
-----------------
DNA (780bp)
protein (260aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=AR9
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
rifcsphigho2_02_scaffold_14979_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(3937..4521)
-----------------
DNA (585bp)
protein (195aa)
50S ribosomal protein L18P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV1_FERPA
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=AR9
50S ribosomal protein L18
rifcsphigho2_02_scaffold_14979_8

Not on your lists

comp(4535..4984)
-----------------
DNA (450bp)
protein (150aa)
Large subunit ribosomal protein L19e {ECO:0000313|EMBL:KHO50240.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L19e id=5800045 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L19e
rifcsphigho2_02_scaffold_14979_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(5035..5628)
-----------------
DNA (594bp)
protein (198aa)
50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e Tax=AR9
50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e id=5042318 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribosomal protein L32E
rifcsphigho2_02_scaffold_14979_10

Not on your lists


comp(5634..6182)
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F6817
Large subunit ribosomal protein L6 {ECO:0000313|EMBL:KHO50238.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L6
rifcsphigho2_02_scaffold_14979_11

Not on your lists


comp(6217..6606)
-----------------
DNA (390bp)
protein (130aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8
rifcsphigho2_02_scaffold_14979_12

Not on your lists


comp(6854..7345)
-----------------
DNA (492bp)
protein (164aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12307.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
rifcsphigho2_02_scaffold_14979_13

Not on your lists

comp(7398..8081)
-----------------
DNA (684bp)
protein (228aa)
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rps4e; 30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e id=5041771 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S4E, central domain-containing protein
rifcsphigho2_02_scaffold_14979_14

Not on your lists


comp(8078..8512)
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24
rifcsphigho2_02_scaffold_14979_15

Not on your lists


comp(8519..8920)
-----------------
DNA (402bp)
protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=5042311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14P
rifcsphigho2_02_scaffold_14979_16

Not on your lists


comp(8917..9351)
-----------------
DNA (435bp)
protein (145aa)
30S ribosomal protein S17P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXU1_FERPA
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17
rifcsphigho2_02_scaffold_14979_17

Not on your lists

comp(9389..9643)
-----------------
DNA (255bp)
protein (85aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VSM3_9EURY
ribonuclease P protein component 1
rifcsphigho2_02_scaffold_14979_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9682..9891)
-----------------
DNA (210bp)
protein (70aa)
Protein translation factor SUI1 homolog n=2 Tax=Aeropyrum RepID=SUI1_AERPE
translation factor SUi1-like protein; K03113 translation initiation factor 1 Tax=AR9
translation initiation factor Sui1
Displaying 18 items

View Taxonomy