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rifcsphigho2_02_scaffold_33281

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_33281_1
unknown

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1..246
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_33281_2

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230..853
-----------------
DNA (624bp)
protein (208aa)
Marine sediment metagenome DNA, contig: S12H4_L02343 {ECO:0000313|EMBL:GAI83156.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
rifcsphigho2_02_scaffold_33281_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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988..3474
-----------------
DNA (2487bp)
protein (829aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_13_Woesearchaeota_36_6_curated
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5048384 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
rifcsphigho2_02_scaffold_33281_4
CG_Woesearch_02, Woesearchaeota, Archaea

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3471..4574
-----------------
DNA (1104bp)
protein (368aa)
hypothetical protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=CG_Woesearch_02
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=5048385 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_33281_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4649..5380
-----------------
DNA (732bp)
protein (244aa)
Peptidase M50 Tax=RBG_13_Woesearchaeota_36_6_curated
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_33281_6
GWF2_OD1_38_8, Parcubacteria, Bacteria

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5383..5736
-----------------
DNA (354bp)
protein (118aa)
Tax=GWF2_OD1_38_8
rifcsphigho2_02_scaffold_33281_7
unknown

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5740..6051
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_33281_8
AR15, Woesearchaeaota, DPANN, Archaea

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6149..6469
-----------------
DNA (321bp)
protein (107aa)
id=5799733 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsphigho2_02_scaffold_33281_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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6505..7332
-----------------
DNA (828bp)
protein (276aa)
Related to pirin id=1805083 bin=GWE2_Bacteroidetes_32_14 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
pirin; K06911 Tax=GWE2_Bacteroidetes_32_14_curated
pirin
rifcsphigho2_02_scaffold_33281_10

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7423..8517
-----------------
DNA (1095bp)
protein (365aa)
Dead/deah box helicase domain-containing protein (DeaD) {ECO:0000313|EMBL:AIF18658.1}; EC=3.6.4.13 {ECO:0000313|EMBL:AIF18658.1};; TaxID=1456522 species="Archaea; Euryarchaeota; environmental samples.
ATP-dependent RNA helicase DeaD n=2 Tax=Listeria fleischmannii RepID=H7F360_9LIST
DEAD/DEAH box helicase
rifcsphigho2_02_scaffold_33281_11
unknown

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8664..8804
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_33281_12
unknown

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comp(8822..9067)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_33281_trna_1
unknown

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9320..9437
-----------------
DNA (118bp)
transferRNA
rifcsphigho2_02_scaffold_33281_13
CG_Woesearch_01, Woesearchaeota, Archaea

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9527..9778
-----------------
DNA (252bp)
protein (84aa)
hef; Hef nuclease; K10896 fanconi anemia group M protein Tax=CG_Woesearch_01
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Helicase protein
Displaying 14 items

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