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rifcsphigho2_02_scaffold_23264

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_23264_1
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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comp(1..201)
-----------------
DNA (201bp)
protein (67aa)
ssm:Spirs_3146 alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=130170 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Alanine-tRNA ligase {ECO:0000313|EMBL:KKS70177.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
Alanine-tRNA ligase
rifcsphigho2_02_scaffold_23264_2
unknown

Not on your lists

288..866
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(869..1399)
-----------------
DNA (531bp)
protein (177aa)
hypothetical protein id=5049685 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_02_scaffold_23264_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(1464..1640)
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A2G6_THEGJ
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_02_scaffold_23264_5
R_OD1_Yanofskybacteria_49_25, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1759..2862
-----------------
DNA (1104bp)
protein (368aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_49_25_curated
Glutamine synthetase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JYK3_STRHJ
glutamine synthetase
rifcsphigho2_02_scaffold_23264_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(2864..3457)
-----------------
DNA (594bp)
protein (198aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Uracil-DNA glycosylase n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BN20_9ACTN
phage SPO1 DNA polymerase-like protein
rifcsphigho2_02_scaffold_23264_7
unknown

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comp(3484..4050)
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_8
unknown

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comp(4053..4352)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_9
unknown

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comp(4367..4579)
-----------------
DNA (213bp)
protein (71aa)
30S ribosomal protein S27ae n=3 Tax=Archaea RepID=K0INM2_NITGG Tax=AR20
rifcsphigho2_02_scaffold_23264_10
unknown

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comp(4582..4878)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_11
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4884..5072)
-----------------
DNA (189bp)
protein (63aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
DNA-directed RNA polymerase, subunit E
rifcsphigho2_02_scaffold_23264_12
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(5074..5646)
-----------------
DNA (573bp)
protein (191aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsphigho2_02_scaffold_23264_13
unknown

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5782..6369
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_14
GWA1_OP11_41_11_plus, Curtissbacteria, Microgenomates, Bacteria

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6366..6605
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZX1_9BACT
Uncharacterized protein Tax=GWA1_OP11_41_11_plus
rifcsphigho2_02_scaffold_23264_15
unknown

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comp(6631..7227)
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_16
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(7266..7919)
-----------------
DNA (654bp)
protein (218aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Endonuclease III n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O66636_AQUAE
mutY1; endonuclease III
rifcsphigho2_02_scaffold_23264_17
unknown

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comp(7919..8347)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_18
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(8390..9526)
-----------------
DNA (1137bp)
protein (379aa)
cytochrome c biogenesis protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
cytochrome c biogenesis protein id=14424170 bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
cytochrome c biogenesis protein
rifcsphigho2_02_scaffold_23264_19
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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9624..9950
-----------------
DNA (327bp)
protein (109aa)
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
thioredoxin; K03671 thioredoxin 1 id=5047485 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
thioredoxin
rifcsphigho2_02_scaffold_23264_20
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

10002..10856
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVA9_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC82513.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
rifcsphigho2_02_scaffold_23264_21
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10926..11585
-----------------
DNA (660bp)
protein (220aa)
metalloendopeptidase, glycoprotease family (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_cura
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
O-sialoglycoprotein endopeptidase
rifcsphigho2_02_scaffold_23264_22
unknown

Not on your lists

comp(11480..11755)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_23
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(11791..12450)
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Uncharacterized protein id=5799738 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_23264_24
unknown

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comp(12495..12803)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_25
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12846..13577)
-----------------
DNA (732bp)
protein (244aa)
hypothetical protein
id=1867620 Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Uncharacterized protein id=5048708 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_23264_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13699..14910
-----------------
DNA (1212bp)
protein (404aa)
radical SAM protein; K06935 Tax=CG_Woesearch_02
radical SAM protein; K06935 id=5048707 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative Fe-S oxidoreductase
rifcsphigho2_02_scaffold_23264_27
unknown

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14907..15650
-----------------
DNA (744bp)
protein (248aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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15712..16749
-----------------
DNA (1038bp)
protein (346aa)
Putative uncharacterized protein id=2205200 bin=GWB2_Ignavibacteria_35_12 species=Prochlorococcus marinus genus=Prochlorococcus taxon_order=Prochlorales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
rifcsphigho2_02_scaffold_23264_29
unknown

Not on your lists

16746..17057
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23264_30
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17059..18759)
-----------------
DNA (1701bp)
protein (567aa)
DEAD/H associated domain protein id=5800585 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DEAD/H associated domain protein Tax=AR15
DEAD/H associated protein
Displaying 30 items

View Taxonomy