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rifcsphigho2_02_scaffold_9056

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9056_1
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3..362)
-----------------
DNA (360bp)
protein (120aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=AR9
Elongation factor 1-alpha n=7 Tax=Methanocaldococcaceae RepID=EF1A_METJA id=5103708 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
rifcsphigho2_02_scaffold_9056_2
AR9, Woesearchaeaota, DPANN, Archaea

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comp(349..462)
-----------------
DNA (114bp)
protein (38aa)
ef1a, tuf; elongation factor 1-alpha (EC:3.6.5.3); K03231 elongation factor 1-alpha Tax=AR9
rifcsphigho2_02_scaffold_9056_3

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comp(646..2787)
-----------------
DNA (2142bp)
protein (714aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Elongation factor 2
rifcsphigho2_02_scaffold_9056_4
AR18, Woesearchaeaota, DPANN, Archaea

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comp(2811..3299)
-----------------
DNA (489bp)
protein (163aa)
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045753 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=AR18
nucleoside-diphosphate kinase (EC:2.7.4.6)
rifcsphigho2_02_scaffold_9056_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3326..3523)
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e Tax=RBG_13_Woesearchaeota_36_6_curated
large subunit ribosomal protein L24e
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5241392 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_9056_6
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3529..3882)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=AR9
30S ribosomal protein S28e
rifcsphigho2_02_scaffold_9056_7

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comp(3893..4213)
-----------------
DNA (321bp)
protein (107aa)
50S ribosomal protein L7, large subunit ribosomal protein L7Ae {ECO:0000313|EMBL:KHO49134.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5043963 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L7Ae
rifcsphigho2_02_scaffold_9056_8
Leptospira yanagawae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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4398..4640
-----------------
DNA (243bp)
protein (81aa)
BolA-like protein n=1 Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 RepID=R8ZPS6_9LEPT
BolA-like protein {ECO:0000313|EMBL:EOQ88106.1}; TaxID=1249483 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira yanagawae serovar Saopaulo str. Sao Paul
BolA family transcriptional regulator
rifcsphigho2_02_scaffold_9056_9
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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4640..4951
-----------------
DNA (312bp)
protein (104aa)
Glutaredoxin n=1 Tax=Leptospira interrogans serovar Autumnalis str. LP101 RepID=M6M8T0_LEPIR
glutaredoxin-like protein
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1218582 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans serovar Valbuzzi str. Duyster.;
rifcsphigho2_02_scaffold_9056_10

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5018..6757
-----------------
DNA (1740bp)
protein (580aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Aquifex aeolicus (strain VF5) RepID=GLMS_AQUAE
glmS; glucosamine--fructose-6-phosphate aminotransferase
rifcsphigho2_02_scaffold_9056_11
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

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6800..7051
-----------------
DNA (252bp)
protein (84aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
rifcsphigho2_02_scaffold_9056_12
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(7095..8402)
-----------------
DNA (1308bp)
protein (436aa)
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=CG_Woesearch_03
DEAD/DEAH box helicase domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL25_METZD
DEAD/DEAH box helicase
rifcsphigho2_02_scaffold_9056_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8562..9098)
-----------------
DNA (537bp)
protein (179aa)
DnaJ-like molecular chaperone n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WP2_METBU
heat shock protein DnaJ-like protein Tax=AR9
heat shock protein DnaJ-like protein
rifcsphigho2_02_scaffold_9056_14
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(9098..10504)
-----------------
DNA (1407bp)
protein (469aa)
ATP-dependent RNA helicase {ECO:0000313|EMBL:KHE92173.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" sourc
DEAD/DEAH box helicase domain protein id=2433079 bin=GWF1_Spirochaetes_51_8 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
DEAD/DEAH box helicase domain-containing protein
rifcsphigho2_02_scaffold_9056_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10662..11888
-----------------
DNA (1227bp)
protein (409aa)
metallophosphoesterase Tax=RBG_13_Woesearchaeota_36_6_curated
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsphigho2_02_scaffold_9056_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(11970..13808)
-----------------
DNA (1839bp)
protein (613aa)
UPI0003D1B100 related cluster n=1 Tax=unknown RepID=UPI0003D1B100
cell surface protein Tax=RBG_13_Woesearchaeota_36_6_curated
Cell surface protein
Displaying 16 items

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