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rifcsphigho2_02_scaffold_27860

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_27860_1
unknown

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comp(1..123)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27860_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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207..704
-----------------
DNA (498bp)
protein (166aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
rifcsphigho2_02_scaffold_27860_3
Rozella allomycis, Rozella, Cryptomycota, Fungi

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comp(725..1291)
-----------------
DNA (567bp)
protein (189aa)
Prolyl 4-hydroxylase, alpha subunit domain-containing protein {ECO:0000313|EMBL:EPZ33116.1}; EC=1.14.11.- {ECO:0000313|EMBL:EPZ33116.1};; TaxID=988480 species="Eukaryota; Fungi; Cryptomycota; Rozella.
rifcsphigho2_02_scaffold_27860_4
AR17, Woesearchaeaota, DPANN, Archaea

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comp(1284..1901)
-----------------
DNA (618bp)
protein (206aa)
ogfod1, D63, wu:fc33b08, zgc:66379; 2-oxoglutarate and iron-dependent oxygenase domain containing 1 (EC:1.14.11.-) Tax=AR17
Putative component of nua3 histone acetyltransferase complex n=1 Tax=Ixodes ricinus RepID=V5IJL4_IXORI
2-oxoglutarate and iron-dependent oxygenase domain-containing protein, putative
rifcsphigho2_02_scaffold_27860_5
unknown

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comp(1903..2244)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27860_6
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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2320..3855
-----------------
DNA (1536bp)
protein (512aa)
ATP-dependent DNA ligase (EC:6.5.1.1) Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z7M5_9CREN
rifcsphigho2_02_scaffold_27860_7
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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3855..4055
-----------------
DNA (201bp)
protein (67aa)
ATP-dependent DNA ligase (EC:6.5.1.1) Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
ATP-dependent DNA ligase I (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] id=15191040 bin=GWC1_OP11_49_16_COMPLETE species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
ATP-dependent DNA ligase
rifcsphigho2_02_scaffold_27860_8
unknown

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comp(4061..4429)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27860_9
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(4498..6762)
-----------------
DNA (2265bp)
protein (755aa)
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=CG_Woesearch_01
AAA family ATPase, CDC48 subfamily id=5799990 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily
rifcsphigho2_02_scaffold_27860_10
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7074..7976)
-----------------
DNA (903bp)
protein (301aa)
Metalloenzyme superfamily n=2 Tax=Paenibacillus RepID=F5LNW1_9BACL
Metalloenzyme superfamily {ECO:0000313|EMBL:EGL15843.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
type I phosphodiesterase/nucleotide pyrophosphatase
rifcsphigho2_02_scaffold_27860_11
AR9, Woesearchaeaota, DPANN, Archaea

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comp(8008..8427)
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein
Uncharacterized protein Tax=AR9
hypothetical protein id=5042289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_27860_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(8513..9517)
-----------------
DNA (1005bp)
protein (335aa)
putative deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] id=18248067 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
deoxyhypusine synthase (EC:2.5.1.46)
rifcsphigho2_02_scaffold_27860_13
unknown

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comp(9526..10077)
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27860_14
unknown

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10253..10858
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27860_15

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10915..11289
-----------------
DNA (375bp)
protein (125aa)
TatD DNase family protein {ECO:0000313|EMBL:KHO49852.1}; EC=3.1.21.- {ECO:0000313|EMBL:KHO49852.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Hydrolase, TatD family id=5800627 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
TatD family hydrolase
Displaying 15 items

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