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This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

rifcsphigho2_02_scaffold_42948

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_42948_1
CG_Woesearch_02, Woesearchaeota, Archaea

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181..1374
-----------------
DNA (1194bp)
protein (398aa)
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_42948_2
unknown

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comp(1394..2404)
-----------------
DNA (1011bp)
protein (337aa)

This feature has no annotations

rifcsphigho2_02_scaffold_42948_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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2658..3188
-----------------
DNA (531bp)
protein (177aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rifcsphigho2_02_scaffold_42948_4
GWB1_OD1_37_5, Nomurabacteria, Parcubacteria, Bacteria

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3188..3469
-----------------
DNA (282bp)
protein (94aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F6D
hypothetical protein GobsU_07752 Tax=GWB1_OD1_37_5
rifcsphigho2_02_scaffold_42948_5
unknown

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comp(3489..3794)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_02_scaffold_42948_6
unknown

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3973..4086
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsphigho2_02_scaffold_42948_7

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4182..4445
-----------------
DNA (264bp)
protein (88aa)
fdiV; ferredoxin [2Fe-2S] 4 id=5044573 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ferredoxin [2Fe-2S] 4 {ECO:0000313|EMBL:KHO46307.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
fdiV; ferredoxin [2Fe-2S] 4
rifcsphigho2_02_scaffold_42948_8
AR9, Woesearchaeaota, DPANN, Archaea

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4459..5034
-----------------
DNA (576bp)
protein (192aa)
peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=AR9
Peroxiredoxin n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUM0_METPS
peroxiredoxin
rifcsphigho2_02_scaffold_42948_9
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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5047..5640
-----------------
DNA (594bp)
protein (198aa)
Superoxide dismutase (EC:1.15.1.1) Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
rifcsphigho2_02_scaffold_42948_10
unknown

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5732..6910
-----------------
DNA (1179bp)
protein (393aa)

This feature has no annotations

rifcsphigho2_02_scaffold_42948_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(6927..7271)
-----------------
DNA (345bp)
protein (115aa)
Nucleic acid-binding, OB-fold-like Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_42948_12
unknown

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7326..7559
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

Displaying 12 items

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