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rifcsphigho2_02_scaffold_37504

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_37504_1
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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1..126
-----------------
DNA (126bp)
protein (42aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ94_9EURY
rifcsphigho2_02_scaffold_37504_2
unknown

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comp(127..561)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37504_3
unknown

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comp(856..1530)
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37504_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1622..1939)
-----------------
DNA (318bp)
protein (106aa)
ribonuclease p protein subunit rpp21 (EC:3.1.26.5)
Ribonuclease P protein component 4 id=5799801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_37504_5
AR17, Woesearchaeaota, DPANN, Archaea

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2300..2629
-----------------
DNA (330bp)
protein (110aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=5043579 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
methylated-DNA/protein-cysteine methyltransferase
rifcsphigho2_02_scaffold_37504_6
unknown

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comp(2602..2826)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37504_7

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comp(2904..3698)
-----------------
DNA (795bp)
protein (265aa)
Inositol monophosphatase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKX8_HALO1
inositol monophosphatase
rifcsphigho2_02_scaffold_37504_8
AR17, Woesearchaeaota, DPANN, Archaea

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3754..4533
-----------------
DNA (780bp)
protein (260aa)
Transcriptional regulator, TrmB n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EFH2_PYRF1
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_37504_9
unknown

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4582..4740
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37504_10
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

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4813..5505
-----------------
DNA (693bp)
protein (231aa)
Oxidoreductase FAD/NAD(P)-binding domain protein id=4743605 bin=GWC2_OP3_44_8 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
oxidoreductase FAD-binding domain-containing protein
rifcsphigho2_02_scaffold_37504_11
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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5480..7051
-----------------
DNA (1572bp)
protein (524aa)
leucyl aminopeptidase (EC:3.4.11.1)
leucyl aminopeptidase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF5E
rifcsphigho2_02_scaffold_37504_12
unknown

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7173..7373
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37504_13
CG_Pacearch_01, Pacearchaeota, Archaea

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7440..8360
-----------------
DNA (921bp)
protein (307aa)
trxB; thioredoxin reductase, FAD/NAD(P)-binding (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Laceyella sacchari RepID=UPI0003B32ED9
rifcsphigho2_02_scaffold_37504_14
ACD3, Gracilibacteria, Bacteria

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comp(8405..8797)
-----------------
DNA (393bp)
protein (131aa)
HIT-like 8..136 id=49474 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Displaying 14 items

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