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rifcsphigho2_02_scaffold_41856

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_41856_1
unknown

Not on your lists

comp(16..324)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_02_scaffold_41856_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(401..1096)
-----------------
DNA (696bp)
protein (232aa)
hypothetical protein Tax=AR9
NEQ098 id=5800103 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_41856_3

Not on your lists

comp(1242..1529)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50113.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Uncharacterized protein id=5800782 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_41856_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1546..1782)
-----------------
DNA (237bp)
protein (79aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=AR9
UPI000021CFC7 related cluster id=5800802 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_41856_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1842..2636)
-----------------
DNA (795bp)
protein (265aa)
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=AR9
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
rifcsphigho2_02_scaffold_41856_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2623..3357)
-----------------
DNA (735bp)
protein (245aa)
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=AR9
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5045976 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
exosome complex exonuclease Rrp41
rifcsphigho2_02_scaffold_41856_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3414..4094)
-----------------
DNA (681bp)
protein (227aa)
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=AR9
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative exosome complex RNA-binding protein 1
rifcsphigho2_02_scaffold_41856_8
unknown

Not on your lists

comp(4236..4808)
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsphigho2_02_scaffold_41856_9
unknown

Not on your lists

comp(4902..5297)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_41856_10
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5348..6076)
-----------------
DNA (729bp)
protein (243aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=AR9
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha
rifcsphigho2_02_scaffold_41856_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6113..6445)
-----------------
DNA (333bp)
protein (111aa)
Ribonuclease P protein component 2 n=2 Tax=Thermococcus RepID=RNP2_THEGJ id=5103841 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease P protein component 2
Tax=AR9
rifcsphigho2_02_scaffold_41856_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6454..6756)
-----------------
DNA (303bp)
protein (101aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003629F02
single-stranded DNA-binding protein; K07466 replication factor A1 Tax=AR9
replication factor A1
rifcsphigho2_02_scaffold_41856_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6766..7191)
-----------------
DNA (426bp)
protein (142aa)
Tax=AR9
rifcsphigho2_02_scaffold_41856_14
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(7316..8821)
-----------------
DNA (1506bp)
protein (502aa)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=AR9
Putative tRNA synthetase class II core domain (G, H, P, S and T) id=4930112 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_02_scaffold_41856_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8885..10084)
-----------------
DNA (1200bp)
protein (400aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=AR9
Replication factor C large subunit id=5799900 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Replication factor C large subunit
rifcsphigho2_02_scaffold_41856_16
unknown

Not on your lists

comp(10140..10562)
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsphigho2_02_scaffold_41856_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

10904..12238
-----------------
DNA (1335bp)
protein (445aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=AR9
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
Displaying 17 items

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