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rifcsphigho2_02_scaffold_54220

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_54220_1
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

238..834
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038023B2
Ser/Thr protein phosphatase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
Metallophosphoesterase
rifcsphigho2_02_scaffold_54220_2
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

841..1260
-----------------
DNA (420bp)
protein (140aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
rifcsphigho2_02_scaffold_54220_3
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(1444..2826)
-----------------
DNA (1383bp)
protein (461aa)
signal recognition particle Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
Signal recognition particle 54 kDa protein id=5800735 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
rifcsphigho2_02_scaffold_54220_4
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2908..3435)
-----------------
DNA (528bp)
protein (176aa)
NYN domain protein n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0SF06_9DELT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
hypothetical protein
rifcsphigho2_02_scaffold_54220_5
unknown

Not on your lists

comp(3581..4228)
-----------------
DNA (648bp)
protein (216aa)

This feature has no annotations

rifcsphigho2_02_scaffold_54220_6
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4359..4814)
-----------------
DNA (456bp)
protein (152aa)
seg Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
rifcsphigho2_02_scaffold_54220_7
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists


comp(4801..5346)
-----------------
DNA (546bp)
protein (182aa)
Ham1 family protein id=2351122 bin=GWD1_TM7_39_7 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Ham1 family protein {ECO:0000313|EMBL:KKS09752.1}; TaxID=1618344 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
putative deoxyribonucleotide triphosphate pyrophosphatase
rifcsphigho2_02_scaffold_54220_8
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(5347..7065)
-----------------
DNA (1719bp)
protein (573aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
Arginine--tRNA ligase id=5800697 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_54220_9
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7109..7759)
-----------------
DNA (651bp)
protein (217aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=5093230 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
rifcsphigho2_02_scaffold_54220_10
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7879..8244)
-----------------
DNA (366bp)
protein (122aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
rifcsphigho2_02_scaffold_54220_trna_1
unknown

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8362..8467
-----------------
DNA (106bp)
transferRNA
rifcsphigho2_02_scaffold_54220_11
unknown

Not on your lists

8550..8687
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_02_scaffold_54220_12

Not on your lists


8633..9085
-----------------
DNA (453bp)
protein (151aa)
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rps15p; 30S ribosomal protein S15P
rifcsphigho2_02_scaffold_54220_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9208..9495)
-----------------
DNA (288bp)
protein (96aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
regulatory protein MarR Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_54220_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

9724..11628
-----------------
DNA (1905bp)
protein (635aa)
hypothetical protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] Tax=RBG_13_Woesearchaeota_36_6_curated
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
rifcsphigho2_02_scaffold_54220_15
unknown

Not on your lists

comp(11704..11916)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

Displaying 16 items

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