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rifcsphigho2_02_scaffold_7461_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_19b

near complete RP 31 / 55 MC: 6 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 3
Location: 8149..9192

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 389.0
  • Bit_score: 166
  • Evalue 1.00e-38
Probable tRNA pseudouridine synthase D id=5799863 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 336.0
  • Bit_score: 251
  • Evalue 1.40e-63
Putative tRNA pseudouridine synthase D {ECO:0000313|EMBL:AJF61194.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 335.0
  • Bit_score: 251
  • Evalue 2.00e-63

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Taxonomy

archaeon GW2011_AR15 → Archaea

Sequences

DNA sequence
Length: 1044
ATGGAAGAGTTTACAATTACAACTGGAACCATGTATAAGCTCAAACAAGTTCCGGAAGATTTTGTAGTAATAGAAATTCCTGCCCTGCAGAAGGAAAAGCAAGGAAAGTATCTTTATTTCTGGATGAAGAAGAAAGGTTTTAACACCATTGATGCGGTCAAGGAAGTAGCCCGACAGTTACGGATTAAAGAGAAACAGATCGGCTTTGCGGGGAGCAAGGACAAGCATGCCATCACCGAGCAGTTGATTTCAATTATGGGCATGAAGAAGGAGGATGTTGAAAAGGTAAAAATTGAAAATGTCTCTTTGAATTTTTATGGTTATGGAAGTACACCGATTTCTCTGGGCGACTCAGGGGGAAATAGATTTGAGATAGTTCTTCGAAATCTTGAGGATGAAAAGATTGAAAAAATATCTTTATTAGAAAATTATTTTGATGAGCAGCGTTTTTCAAAACATAATGTTAGTATCGGCAGGCATCTGCTCAAGAAAGAATTTGGGAAAGCAGTGTCTTTGATCGATGAGCTTAAAGTACAAAAACATCTAGAACAAAAAAAGACTGATTATGTAGGAGCGCTAAAAGTCTTGCCGGCACGCTCCCTGCGGATGTATGTGAATGCCTATCAGAGTTATATCTGGAATAAAACGGTAGCCAAGTACTTGGAACAAAAGGGCGAGGTATGGAAAAAAGTTACTTACTCTGGCGGGGAATTAGTATTCACCTCTGATGCAGAAAAATTCAAGGAGTTTAAGATTCCGTTGGTTGGGTTTGGACAAGAAACGGCGGAAGATCCAGAAGTTCAAGACCTTATTGATCAGGTCATGGAGGAAGAAAATATCTCTTATGCTGATTTCATTATCAAGCAGATTCCGGAACTGACTATGGAAGGAGAGCTGCGTAAGGTGTTTGTAGAAGTTAAGGACTTGAAAATTGGGAAAAAAGTTGATGACGAATTGAATTCCGAAAAGAAGAAAGTGAAAGTTAGTTTTACTCTGCCGAAGGGAAGTTATGCGACCATGGCGATTAGGAAAATTGTTTCTTAG
PROTEIN sequence
Length: 348
MEEFTITTGTMYKLKQVPEDFVVIEIPALQKEKQGKYLYFWMKKKGFNTIDAVKEVARQLRIKEKQIGFAGSKDKHAITEQLISIMGMKKEDVEKVKIENVSLNFYGYGSTPISLGDSGGNRFEIVLRNLEDEKIEKISLLENYFDEQRFSKHNVSIGRHLLKKEFGKAVSLIDELKVQKHLEQKKTDYVGALKVLPARSLRMYVNAYQSYIWNKTVAKYLEQKGEVWKKVTYSGGELVFTSDAEKFKEFKIPLVGFGQETAEDPEVQDLIDQVMEEENISYADFIIKQIPELTMEGELRKVFVEVKDLKIGKKVDDELNSEKKKVKVSFTLPKGSYATMAIRKIVS*