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rifcsphigho2_02_scaffold_7461

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7461_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(73..609)
-----------------
DNA (537bp)
protein (179aa)
O-methyltransferase family 3 Tax=AR17
O-methyltransferase family 3 id=5800324 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
O-methyltransferase family protein
rifcsphigho2_02_scaffold_7461_2
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

678..1088
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
hypothetical protein id=5045794 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_7461_3
unknown

Not on your lists

comp(1109..1471)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7461_4
unknown

Not on your lists

comp(1513..1728)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7461_5

Not on your lists

comp(1722..2846)
-----------------
DNA (1125bp)
protein (375aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52746.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
UPF0176 protein IALB_0520 id=5800321 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
sulfurtransferase
rifcsphigho2_02_scaffold_7461_6
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2937..4142)
-----------------
DNA (1206bp)
protein (402aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000368B924
Metallo-dependent hydrolases Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
rifcsphigho2_02_scaffold_7461_7
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4146..5381)
-----------------
DNA (1236bp)
protein (412aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
Uncharacterized protein id=5799556 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7461_8
AR18, Woesearchaeaota, DPANN, Archaea

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comp(5407..6585)
-----------------
DNA (1179bp)
protein (393aa)
id=5047350 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Tax=AR18
rifcsphigho2_02_scaffold_7461_9
unknown

Not on your lists

6669..7184
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7461_10
unknown

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7209..8186
-----------------
DNA (978bp)
protein (326aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7461_11

Not on your lists

8149..9192
-----------------
DNA (1044bp)
protein (348aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D id=5799863 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative tRNA pseudouridine synthase D {ECO:0000313|EMBL:AJF61194.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_7461_12
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9202..9564)
-----------------
DNA (363bp)
protein (121aa)
Ferric uptake regulator, Fur family n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XIW1_CALS8
Ferric uptake regulator family protein Tax=AR1
Fur family ferric uptake regulator
rifcsphigho2_02_scaffold_7461_13
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

9629..10393
-----------------
DNA (765bp)
protein (255aa)
zinc/iron permease id=5802294 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Zinc/iron permease {ECO:0000313|EMBL:KKR05315.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
zinc/iron permease
rifcsphigho2_02_scaffold_7461_14

Not on your lists

comp(10403..11008)
-----------------
DNA (606bp)
protein (202aa)
kad; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] id=5041683 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
kad; adenylate kinase
rifcsphigho2_02_scaffold_7461_15

Not on your lists

11113..11847
-----------------
DNA (735bp)
protein (245aa)
Protein-disulfide isomerase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DWL0_METI4
Protein-disulfide isomerase {ECO:0000313|EMBL:KKR45017.1}; Flags: Fragment;; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
dsbG; protein-disulfide isomerase
rifcsphigho2_02_scaffold_7461_16
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

11849..12316
-----------------
DNA (468bp)
protein (156aa)
slr0565; hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
vitamin K epoxide reductase id=18247981 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsphigho2_02_scaffold_7461_17
RHI_RIF_OP11_01_44_25, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

12540..13829
-----------------
DNA (1290bp)
protein (430aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_44_25_curated
rifcsphigho2_02_scaffold_7461_18
unknown

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13833..14033
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7461_19
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(13989..14660)
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8IC54_PSEAI
exonuclease Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
exonuclease
rifcsphigho2_02_scaffold_7461_20
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14707..16500
-----------------
DNA (1794bp)
protein (598aa)
Peptidase U32 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DNX5_DESRL
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:AEG60694.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23
rifcsphigho2_02_scaffold_7461_21
unknown

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16521..16862
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7461_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17114..17602
-----------------
DNA (489bp)
protein (163aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049679 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
DEAD/H associated protein
rifcsphigho2_02_scaffold_7461_23

Not on your lists

17599..18423
-----------------
DNA (825bp)
protein (275aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP-dependent helicase Lhr and Lhr-like protein helicase (EC:3.6.4.-)
DEAD/H associated protein {ECO:0000313|EMBL:KHO51768.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Displaying 23 items

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